G793334


Basic Information

Item Value
gene id G793334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31302105 ~ 31302869 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903025
CTGCAGTGCAGGGGGTggttcctcctgcaggcagaggagggtcgttagtgattggagtcacctgggcTCTAAGTATTTAAACTGTGTCACtaatcacttctctctctctgctcctccaggtatgaagctgttttgtttgttcttttgtaattttgcatagttttcactcagccattcacacacacagattcacgaatccatgcactttacatacaccttacattatgatacagtgccttgcgaaagtattcggcccctttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaactttaacaaatcaaaaactgaatttgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagtgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903025 True 765 lncRNA 0.41 1 31302105 31302869
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118965934 LOC106595224 coding downstream 261890 31038078 ~ 31040215 (-)
LOC118965933 NA coding downstream 467717 30832726 ~ 30834388 (-)
LOC110532982 NA coding downstream 941313 30359807 ~ 30360792 (-)
LOC110531887 LOC106577486 coding downstream 1948506 29344381 ~ 29353599 (-)
LOC110531884 LOC106577488 coding downstream 2127517 29140350 ~ 29174588 (-)
LOC110531151 NA coding upstream 66614 31369483 ~ 31494494 (-)
LOC110531916 NA coding upstream 470098 31772967 ~ 31780212 (-)
LOC110531919 LOC106577449 coding upstream 790325 32093194 ~ 32102718 (-)
slx1b LOC106577450 coding upstream 811435 32114304 ~ 32122169 (-)
LOC110531923 LOC106577454 coding upstream 875410 32178279 ~ 32201170 (-)
G793305 NA non-coding downstream 16561 31285327 ~ 31285544 (-)
G793279 NA non-coding downstream 32270 31269437 ~ 31269835 (-)
G793007 NA non-coding downstream 220535 31081143 ~ 31081570 (-)
G792905 NA non-coding downstream 278977 30933129 ~ 31023128 (-)
G792799 NA non-coding downstream 371325 30930560 ~ 30930780 (-)
G793349 NA non-coding upstream 8319 31311188 ~ 31311418 (-)
G793390 NA non-coding upstream 45154 31348023 ~ 31348438 (-)
G793453 NA non-coding upstream 88323 31391192 ~ 31391465 (-)
G793455 NA non-coding upstream 89102 31391971 ~ 31392412 (-)
G793463 NA non-coding upstream 96285 31399154 ~ 31399422 (-)
G792267 NA other downstream 944141 30315310 ~ 30357964 (-)
G790598 NA other downstream 2153088 29131374 ~ 29149017 (-)
G790551 NA other downstream 2232918 29068852 ~ 29069187 (-)
G790535 NA other downstream 2252861 29048898 ~ 29049244 (-)
LOC110531881 LOC106577491 other downstream 2258298 29042575 ~ 29045196 (-)
G793472 NA other upstream 100613 31403482 ~ 31403869 (-)
G793489 NA other upstream 115586 31418455 ~ 31418973 (-)
G793842 NA other upstream 358370 31661239 ~ 31662198 (-)
G794311 LOC106577443 other upstream 723202 32026071 ~ 32028445 (-)
G796733 rl32 other upstream 2748190 34051059 ~ 34057549 (-)

Expression

G793334 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
End of interactive chart.

G793334 Expression in each Bioproject

Bar chart with 17 bars.
G793334 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network