G793486


Basic Information

Item Value
gene id G793486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31414138 ~ 31414420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903179
ctcaggacctcagactggggcgaaggttcaccttccaacaggacaacgaccctaagcacacagacaagacaacacagaagtggcttcaggacaagtctctgaatgtccttgagtggcccagccagagcctggacaaacatctctggagaaacttgaaaatagctgtgcagcgacactccccatccaacctgacatagcttgagaggatcggcagagaagaatgggagaaacgccccaaatacaggtgttccaagcttatagtctcatacccaagaaggctcga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903179 True 283 lncRNA 0.51 1 31414138 31414420

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 815791 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1127899 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 1940349 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2032469 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 2073785 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 338762 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 485640 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 588446 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 663198 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 697372 32111792 ~ 32114299 (+)
G793397 NA non-coding upstream 32691 31352101 ~ 31381447 (+)
G793389 NA non-coding upstream 65728 31348088 ~ 31348410 (+)
G793376 NA non-coding upstream 74795 31339120 ~ 31339343 (+)
G793324 NA non-coding upstream 117408 31296525 ~ 31296730 (+)
G793320 NA non-coding upstream 118882 31295020 ~ 31295256 (+)
G793488 NA non-coding downstream 4041 31418461 ~ 31418932 (+)
G793497 NA non-coding downstream 8193 31422613 ~ 31422848 (+)
G793506 NA non-coding downstream 14851 31429271 ~ 31429497 (+)
G793520 NA non-coding downstream 25262 31439682 ~ 31439977 (+)
G793615 NA non-coding downstream 86018 31500438 ~ 31500677 (+)
taf6l taf6l other upstream 3926615 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 4034474 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 5000606 26413112 ~ 26413532 (+)
G793757 LOC107579696 other downstream 181576 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 708262 32122682 ~ 32124851 (+)
G794892 NA other downstream 1087427 32501847 ~ 32502355 (+)
G794893 NA other downstream 1087976 32502396 ~ 32502749 (+)

Expression


Co-expression Network