G793488


Basic Information

Item Value
gene id G793488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31418461 ~ 31418932 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903181
gccacacccaatggtacaacacctgataggtggggtcaggtgcatcatgtcttcgtcccagtctgcagtgtagaggcagtcatcagtttctgttgcattgagtgtgcaatggatctcagcttggggagtcttatatgggtgcagagtgtagatttgagctttcagttggttgaacttaaactggatgtgaggggtggcaggccctgtgggtaggcattttacccagtacacttcttgggcttcagacagtgtggtcatcggcaggagtggcatcctcatcattcttactgggtgatcaggtgttgaagtggtagggttggttgtaatcttgctgctcctgctgcatgtGTCTAGGAGAgggtcctcttcctcttcctggtgcccctccacgtcctcttcctctttctctccattgctgttgctgcGGGGAGAGTGGTTTCGTGCAATATTTGGCATAGTGACCGGGAATTCC

Function

NR:

description
uncharacterized protein LOC110528531

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU903181 True 472 lncRNA 0.51 1 31418461 31418932

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 820114 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1132222 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 1944672 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2036792 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 2078108 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 334250 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 481128 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 583934 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 658686 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 692860 32111792 ~ 32114299 (+)
G793486 NA non-coding upstream 4041 31414138 ~ 31414420 (+)
G793397 NA non-coding upstream 37014 31352101 ~ 31381447 (+)
G793389 NA non-coding upstream 70051 31348088 ~ 31348410 (+)
G793376 NA non-coding upstream 79118 31339120 ~ 31339343 (+)
G793324 NA non-coding upstream 121731 31296525 ~ 31296730 (+)
G793497 NA non-coding downstream 3681 31422613 ~ 31422848 (+)
G793506 NA non-coding downstream 10339 31429271 ~ 31429497 (+)
G793520 NA non-coding downstream 20750 31439682 ~ 31439977 (+)
G793615 NA non-coding downstream 81506 31500438 ~ 31500677 (+)
G793622 NA non-coding downstream 84155 31503087 ~ 31503412 (+)
taf6l taf6l other upstream 3930938 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 4038797 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 5004929 26413112 ~ 26413532 (+)
G793757 LOC107579696 other downstream 177064 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 703750 32122682 ~ 32124851 (+)
G794892 NA other downstream 1082915 32501847 ~ 32502355 (+)
G794893 NA other downstream 1083464 32502396 ~ 32502749 (+)

Expression


Co-expression Network