G793622


Basic Information

Item Value
gene id G793622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31503087 ~ 31503412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903317
gagttttctttcttgatctcagtactgaatataatgtgtgtgaatgtggtcaagagttagaacaatgactgtctgttccttggtagaaatgaatgaacgatatcttcagactggctagaatgcttatctacacgagAAGACCTTGGCtcgtaaattatattaaattggtagggcgacggatgtgggaaggcttgagatacagcctttgtactggaacggagatggcacgggttggtgctgaaactaatgacgtcattttcagtttataacctgtggtaaactgtatcgtattcagtactctcgtgaataaactctGCTGATTGACT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU903317 True 326 lncRNA 0.40 1 31503087 31503412

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 904740 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1216848 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 2029298 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2121418 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 2162734 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 249770 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 396648 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 499454 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 574206 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 608380 32111792 ~ 32114299 (+)
G793615 NA non-coding upstream 2410 31500438 ~ 31500677 (+)
G793520 NA non-coding upstream 63110 31439682 ~ 31439977 (+)
G793506 NA non-coding upstream 73590 31429271 ~ 31429497 (+)
G793497 NA non-coding upstream 80239 31422613 ~ 31422848 (+)
G793488 NA non-coding upstream 84155 31418461 ~ 31418932 (+)
G793649 NA non-coding downstream 19822 31523234 ~ 31523513 (+)
G793690 NA non-coding downstream 44408 31547820 ~ 31548048 (+)
G793716 NA non-coding downstream 59110 31562522 ~ 31562723 (+)
G793739 NA non-coding downstream 80836 31584248 ~ 31584549 (+)
G793784 NA non-coding downstream 110549 31613961 ~ 31614219 (+)
taf6l taf6l other upstream 4015564 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 4123423 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 5089555 26413112 ~ 26413532 (+)
G793757 LOC107579696 other downstream 92584 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 619270 32122682 ~ 32124851 (+)
G794892 NA other downstream 998435 32501847 ~ 32502355 (+)
G794893 NA other downstream 998984 32502396 ~ 32502749 (+)

Expression


Co-expression Network