G793739


Basic Information

Item Value
gene id G793739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31584248 ~ 31584549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903434
tatatgcatattattagtagcaTTGAATAGaaaccactctgaagtttctaaagctgtttgaatgatgtctgtgagtataacagaactcatatggcaggcaaaaacctgagaagaaatccaaacaggaagtgagaaatctgaggttggtagaTTCTTGACACAGTTCCAATTGAAATcccattgagatatggatgaagttgcacttcttagggcttccactagatgtcaaccgtctatagaaatttgaatgaagcttctactgtgttgtgtgACTGAATAAGAGCAGAATGAGCCAtgtgtct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903434 True 302 lncRNA 0.38 1 31584248 31584549

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 985901 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1298009 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 2110459 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2202579 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 2243895 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 168633 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 315511 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 418317 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 493069 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 527243 32111792 ~ 32114299 (+)
G793716 NA non-coding upstream 21525 31562522 ~ 31562723 (+)
G793690 NA non-coding upstream 36200 31547820 ~ 31548048 (+)
G793649 NA non-coding upstream 60735 31523234 ~ 31523513 (+)
G793622 NA non-coding upstream 80836 31503087 ~ 31503412 (+)
G793615 NA non-coding upstream 83571 31500438 ~ 31500677 (+)
G793784 NA non-coding downstream 29412 31613961 ~ 31614219 (+)
G793836 NA non-coding downstream 71358 31655907 ~ 31662310 (+)
G793838 NA non-coding downstream 78751 31663300 ~ 31663622 (+)
G793839 NA non-coding downstream 84308 31668857 ~ 31669505 (+)
G793848 NA non-coding downstream 89085 31673634 ~ 31673847 (+)
taf6l taf6l other upstream 4096725 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 4204584 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 5170716 26413112 ~ 26413532 (+)
G793757 LOC107579696 other downstream 11447 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 538133 32122682 ~ 32124851 (+)
G794892 NA other downstream 917298 32501847 ~ 32502355 (+)
G794893 NA other downstream 917847 32502396 ~ 32502749 (+)

Expression


Co-expression Network