G793757 (LOC107579696)


Basic Information

Item Value
gene id G793757
gene name LOC107579696
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31595996 ~ 31596918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903452
gccggaggaatatcacgatctgcgcacggtgttcagtcggtccagggccacctctcttcctccacaccggtcgtatgattgtagtattgatctccttccgggaaccactcctccccggggtagactatactctctgtcggctcccgaacgtaaggctctcgaagattatttgtctgtagctcttgacgccggtaccatagtcccctcctcctctcccgccggagctggggttttttttgtcaagaagaaggacgggtctctgcgcccctgcatagattatcgagggctgaatgacataacagtgaagaatcgttatccgcttcctcttatgtcttcagccttcgagatcctgcagggagccaggtttttcactaagttggaccttcgtaacgcttaccatctcgtgcgcatcagggagggggacgagtggaagacggcgtttaacactccgttagggcactttgaataccgggttcttcctttcggcctcgctaatgctccagctgtctttcaggcattagtcaatgatgtcctgagagacatgctgaacatctttgttttcgtttaccttgacgatatcctgattttttcaccgtcactccagattcatgttcagcacgttcgacgtgtcctccagcgccttttagagaattgtctttttgtgaaggctgagaagtgcacttttcatgcctcctccgtcacatttctcggttctgttatttccgctgaaggcattaagatggatcccgctaaggtccaagctgtcattgattggcccgtccctaagtcacgcgttgagctgcagcgctttctcggcttcgcgaacttctatcgtcgtttcatccgtaatttcggtcaggtggcagctcctctcacagcccttacttctgtcaagacgtgctttaagtggtccgtttccgccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903452 True 923 TUCP 0.51 1 31595996 31596918

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 997649 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1309757 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 2122207 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2214327 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 2255643 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 156264 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 303142 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 405948 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 480700 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 514874 32111792 ~ 32114299 (+)
G793739 NA non-coding upstream 11447 31584248 ~ 31584549 (+)
G793716 NA non-coding upstream 33273 31562522 ~ 31562723 (+)
G793690 NA non-coding upstream 47948 31547820 ~ 31548048 (+)
G793649 NA non-coding upstream 72483 31523234 ~ 31523513 (+)
G793622 NA non-coding upstream 92584 31503087 ~ 31503412 (+)
G793784 NA non-coding downstream 17043 31613961 ~ 31614219 (+)
G793836 NA non-coding downstream 58989 31655907 ~ 31662310 (+)
G793838 NA non-coding downstream 66382 31663300 ~ 31663622 (+)
G793839 NA non-coding downstream 71939 31668857 ~ 31669505 (+)
G793848 NA non-coding downstream 76716 31673634 ~ 31673847 (+)
taf6l taf6l other upstream 4108473 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 4216332 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 5182464 26413112 ~ 26413532 (+)
zgc:112271 bola2 other downstream 525764 32122682 ~ 32124851 (+)
G794892 NA other downstream 904929 32501847 ~ 32502355 (+)
G794893 NA other downstream 905478 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 986688 32583606 ~ 32587388 (+)

Expression


Co-expression Network