G793839


Basic Information

Item Value
gene id G793839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31668857 ~ 31669505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903538
GACGAGGTGGCCTTCTTGAATCCCCACAGTCATGTTCCCTTTTAGCTGTCCTCCCTGCACCATAAAGACCGGGGCCTGTATGGCtgctggtgtggtgtgggttTTAAATGGGTTGTGTGGGAGGTGCGCGAATGGATTTTGTGAATAGGGAGGTGGCACTTCAGTCTTCTCTTCCTGTGGCAGTGGCGGGTATAGAGAGAGCGGGGCCGATGGGGTGGTCACTGTGGgcggtggtgtgttgtggttgttGATTGTGCCTTCTCTGACGTCATCTGAGGCCCCAGCAAGCACACCCATCATATCAGGTTTATTTTGTGGGCGTGTCCTTTTTGTCTCCTCTATTGCCCATGTCCCTATTCTCAGATCagcctcagctctctctctctccttcgttcCTTCCTTCTTGAAAAAATGGCTGCTATTCCTTTCTGCCTCACTCTCTTTCCCGTGCCTGACTGCCTCCTCTAATTCTCTTTCCATAGCGCTGAGTTGCTCCCTTGACGGGGCAACTCCACTAATGTAACCTGCCTGGGTCCATCTCAGCCTAATTCCCCCCCATATCTTCTTTATTGATTTATACTCCTGTTTTCCTCCTGCCCTTTCCTGTATTCTCTGATCTAAATATTCATTGAATTTGAGTTTGGGAACG

Function

NR:

description
uncharacterized protein LOC110512511

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903538 True 649 lncRNA 0.50 1 31668857 31669505

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 1070510 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1382618 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 2195068 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2287188 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 2328504 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 83677 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 230555 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 333361 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 408113 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 442287 32111792 ~ 32114299 (+)
G793838 NA non-coding upstream 5235 31663300 ~ 31663622 (+)
G793836 NA non-coding upstream 6547 31655907 ~ 31662310 (+)
G793784 NA non-coding upstream 54638 31613961 ~ 31614219 (+)
G793739 NA non-coding upstream 84308 31584248 ~ 31584549 (+)
G793716 NA non-coding upstream 106134 31562522 ~ 31562723 (+)
G793848 NA non-coding downstream 4129 31673634 ~ 31673847 (+)
G793856 NA non-coding downstream 8660 31678165 ~ 31678440 (+)
G793877 NA non-coding downstream 19936 31689441 ~ 31689698 (+)
G793907 NA non-coding downstream 39134 31708639 ~ 31708864 (+)
G793956 NA non-coding downstream 122472 31791977 ~ 31792199 (+)
G793757 LOC107579696 other upstream 71939 31595996 ~ 31596918 (+)
taf6l taf6l other upstream 4181334 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 4289193 27379332 ~ 27379664 (+)
zgc:112271 bola2 other downstream 453177 32122682 ~ 32124851 (+)
G794892 NA other downstream 832342 32501847 ~ 32502355 (+)
G794893 NA other downstream 832891 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 914101 32583606 ~ 32587388 (+)

Expression


Co-expression Network