G794073


Basic Information

Item Value
gene id G794073
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31826389 ~ 31826890 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903802
GACTCATGTTAGTTATATTTTCCATAGAGAATGCTAACATAGCTTAGCACTGATACACACTAACCAAGCTGCCCATTGTCCATCACCCGGAACAATGCAGACCATTGACTCTCTATCGGCACATAACGTTAATGTCACCCAACCAAATGTCCCACACCCATAGAGAAATGGAGTTCAGGAAGGAGTTCACCATGGGaaatcctttgttctctctatctctcttacacccaggttctgttatctcaggttgtaaattcctgtaggagactctctccccctggccatgcagaaagagacacagagagaacaaaggaTTTCCCATGGTGAACTCCTGAATCCCCAAAATGGGAATTTGAAACAAAATGTCCACttgtgggaatggtccgtggacacttaagggacgggTATGACGAGtatgtttcatttggtgacctcagagaggacaggaagcACACATAACTATATCTCTGAATGCGTACATTTCTCAATAactatatctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903802 True 502 lncRNA 0.44 1 31826389 31826890

Neighbor

gene id symbol gene type direction distance location
LOC110531916 NA coding downstream 46177 31772967 ~ 31780212 (-)
LOC110531151 NA coding downstream 331895 31369483 ~ 31494494 (-)
LOC118965934 LOC106595224 coding downstream 786174 31038078 ~ 31040215 (-)
LOC118965933 NA coding downstream 992001 30832726 ~ 30834388 (-)
LOC110532982 NA coding downstream 1465597 30359807 ~ 30360792 (-)
LOC110531919 LOC106577449 coding upstream 266304 32093194 ~ 32102718 (-)
slx1b LOC106577450 coding upstream 287414 32114304 ~ 32122169 (-)
LOC110531923 LOC106577454 coding upstream 351389 32178279 ~ 32201170 (-)
LOC110531924 LOC106577455 coding upstream 390253 32217143 ~ 32220999 (-)
LOC110531926 NA coding upstream 395237 32222074 ~ 32239463 (-)
G794063 NA non-coding downstream 11295 31814876 ~ 31815094 (-)
G794048 NA non-coding downstream 28092 31798085 ~ 31798297 (-)
G794047 NA non-coding downstream 30550 31795617 ~ 31795839 (-)
G794043 NA non-coding downstream 34212 31791727 ~ 31792177 (-)
G794042 NA non-coding downstream 34887 31791108 ~ 31791502 (-)
G794075 NA non-coding upstream 2879 31829769 ~ 31830074 (-)
G794077 NA non-coding upstream 5843 31832733 ~ 31840597 (-)
G794080 NA non-coding upstream 17199 31844089 ~ 31844313 (-)
G794085 NA non-coding upstream 28367 31855257 ~ 31855569 (-)
G794089 NA non-coding upstream 34349 31861239 ~ 31861438 (-)
G793842 NA other downstream 164191 31661239 ~ 31662198 (-)
G793489 NA other downstream 407416 31418455 ~ 31418973 (-)
G793472 NA other downstream 422520 31403482 ~ 31403869 (-)
G792267 NA other downstream 1468425 30315310 ~ 30357964 (-)
G790598 NA other downstream 2677372 29131374 ~ 29149017 (-)
G794311 LOC106577443 other upstream 199181 32026071 ~ 32028445 (-)
G796733 rl32 other upstream 2224169 34051059 ~ 34057549 (-)
G797605 NA other upstream 3043065 34869955 ~ 34875879 (-)
G798195 NA other upstream 3527329 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 3558963 35381661 ~ 35400349 (-)

Expression


Co-expression Network