G793996


Basic Information

Item Value
gene id G793996
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31845076 ~ 31845359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU903719
GCCCAGTCGTGGACCAGTTGTGAACGGCGTGCGAGATTGAACCCATAAGAGCTCAGTATCTCCCGTCTGAGTCCCTCATAATTCACGGCCTGGTCAGTGTTCAACTCAAAGTAGACCTTCGGGACCTTCCCAGGGAGGTAGGGTGCCAACATGCTGGCCCACTTGGGCTGGTGCCATCCTTCCCTCTGGGCCATCCTCTCGAAGGTGCACAAATACGACTCCACATCATCTTCCTCCCTTAACTTTACCAGGAACTGATTCGGGCCAGACTCCTGAGCCTTCCC

Function

NR:

description
SH2 domain-containing protein 4B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU903719 True 284 lncRNA 0.56 1 31845076 31845359

Neighbor

gene id symbol gene type direction distance location
LOC110531915 LOC106595846 coding upstream 87574 31753182 ~ 31757502 (+)
LOC110531892 LOC106577482 coding upstream 1246729 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1558837 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 2371287 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 2463407 29354116 ~ 29381669 (+)
LOC110531917 LOC106608522 coding downstream 54701 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 157507 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 232259 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 266433 32111792 ~ 32114299 (+)
zgc:112271 bola2 coding downstream 277400 32122682 ~ 32124851 (+)
G793994 NA non-coding upstream 3990 31840875 ~ 31841086 (+)
G793992 NA non-coding upstream 13140 31831435 ~ 31831936 (+)
G793943 NA non-coding upstream 16239 31828611 ~ 31828837 (+)
G793975 NA non-coding upstream 30952 31813869 ~ 31814124 (+)
G793960 NA non-coding upstream 49735 31795130 ~ 31795341 (+)
G794094 NA non-coding downstream 21157 31866516 ~ 31866747 (+)
G794098 NA non-coding downstream 22284 31867643 ~ 31867857 (+)
G794130 NA non-coding downstream 45635 31890994 ~ 31891194 (+)
G794141 NA non-coding downstream 52029 31897388 ~ 31897611 (+)
G794142 NA non-coding downstream 52485 31897844 ~ 31898059 (+)
G793757 LOC107579696 other upstream 248158 31595996 ~ 31596918 (+)
rbpjb LOC106577485 other upstream 2502873 29248127 ~ 29342203 (+)
taf6l taf6l other upstream 4357553 27480038 ~ 27487523 (+)
G794892 NA other downstream 656488 32501847 ~ 32502355 (+)
G794893 NA other downstream 657037 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 738247 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 2276063 34121422 ~ 34121740 (+)

Expression


Co-expression Network