Gene
RNA
| Item | Value |
|---|---|
| gene id | G794311 |
| gene name | LOC106577443 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 32026071 ~ 32028445 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU904054 | False | 2146 | TUCP | 0.46 | 2 | 32026071 | 32028268 |
| TU904053 | False | 825 | lncRNA | 0.43 | 2 | 32027569 | 32028445 |
| TU904048 | False | 325 | lncRNA | 0.44 | 2 | 32027892 | 32028268 |
| TU904052 | False | 502 | lncRNA | 0.42 | 2 | 32027892 | 32028445 |
| TU904050 | True | 248 | lncRNA | 0.44 | 2 | 32027969 | 32028268 |
32,022,000
32,023,000
32,024,000
32,025,000
32,026,000
32,027,000
32,028,000
32,029,000
32,030,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531916 | NA | coding | downstream | 247357 | 31772967 ~ 31780212 (-) |
| LOC110531151 | NA | coding | downstream | 533075 | 31369483 ~ 31494494 (-) |
| LOC118965934 | LOC106595224 | coding | downstream | 987354 | 31038078 ~ 31040215 (-) |
| LOC118965933 | NA | coding | downstream | 1193181 | 30832726 ~ 30834388 (-) |
| LOC110532982 | NA | coding | downstream | 1666777 | 30359807 ~ 30360792 (-) |
| LOC110531919 | LOC106577449 | coding | upstream | 64749 | 32093194 ~ 32102718 (-) |
| slx1b | LOC106577450 | coding | upstream | 85859 | 32114304 ~ 32122169 (-) |
| LOC110531923 | LOC106577454 | coding | upstream | 149834 | 32178279 ~ 32201170 (-) |
| LOC110531924 | LOC106577455 | coding | upstream | 188698 | 32217143 ~ 32220999 (-) |
| LOC110531926 | NA | coding | upstream | 193682 | 32222074 ~ 32239463 (-) |
| G794255 | NA | non-coding | downstream | 97559 | 31929797 ~ 31930010 (-) |
| G794250 | NA | non-coding | downstream | 104838 | 31922373 ~ 31922731 (-) |
| G794248 | NA | non-coding | downstream | 108509 | 31918733 ~ 31919060 (-) |
| G794143 | NA | non-coding | downstream | 128371 | 31898984 ~ 31899198 (-) |
| G794140 | NA | non-coding | downstream | 130263 | 31896776 ~ 31897306 (-) |
| G794508 | NA | non-coding | upstream | 94228 | 32122673 ~ 32124772 (-) |
| G794537 | NA | non-coding | upstream | 143394 | 32171839 ~ 32171926 (-) |
| G794557 | NA | non-coding | upstream | 186810 | 32215255 ~ 32215470 (-) |
| G794560 | NA | non-coding | upstream | 196504 | 32224949 ~ 32225363 (-) |
| G793842 | NA | other | downstream | 365371 | 31661239 ~ 31662198 (-) |
| G793489 | NA | other | downstream | 608596 | 31418455 ~ 31418973 (-) |
| G793472 | NA | other | downstream | 623700 | 31403482 ~ 31403869 (-) |
| G792267 | NA | other | downstream | 1669605 | 30315310 ~ 30357964 (-) |
| G790598 | NA | other | downstream | 2878552 | 29131374 ~ 29149017 (-) |
| G796733 | rl32 | other | upstream | 2022614 | 34051059 ~ 34057549 (-) |
| G797605 | NA | other | upstream | 2841510 | 34869955 ~ 34875879 (-) |
| G798195 | NA | other | upstream | 3325774 | 35354219 ~ 35354675 (-) |
| LOC110531966 | LOC106571884 | other | upstream | 3357408 | 35381661 ~ 35400349 (-) |
| LOC118966032 | LOC106571870 | other | upstream | 3463581 | 35492026 ~ 35521884 (-) |
