G794318


Basic Information

Item Value
gene id G794318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32040370 ~ 32040643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904062
taagtattcagaccctttgctatgagattcgaaatggagctcaggagcattctgtttccatggatcatccttgagatgtttctacaacttcattggaggtcacctgtggtaaattcaaatgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgcatttcagagcaaagactaagccatgaggtcaaaggaattgtccgtagagctgcgAGACAGCATTGTGCACAGATCacgggaagggtaccaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904062 True 274 lncRNA 0.44 1 32040370 32040643

Neighbor

gene id symbol gene type direction distance location
LOC110531918 LOC106577443 coding upstream 13156 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 47974 31900060 ~ 31992396 (+)
LOC110531915 LOC106595846 coding upstream 282868 31753182 ~ 31757502 (+)
LOC110531892 LOC106577482 coding upstream 1442023 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1754131 30282637 ~ 30288163 (+)
LOC118965935 NA coding downstream 36975 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 71149 32111792 ~ 32114299 (+)
zgc:112271 bola2 coding downstream 82116 32122682 ~ 32124851 (+)
rpl34 rpl34 coding downstream 453847 32494490 ~ 32498602 (+)
ostc ostc coding downstream 479435 32520078 ~ 32539651 (+)
G794165 NA non-coding upstream 117410 31922734 ~ 31922960 (+)
G794157 NA non-coding upstream 127570 31912592 ~ 31912800 (+)
G794142 NA non-coding upstream 142311 31897844 ~ 31898059 (+)
G794141 NA non-coding upstream 142759 31897388 ~ 31897611 (+)
G794130 NA non-coding upstream 149176 31890994 ~ 31891194 (+)
G794377 NA non-coding downstream 63885 32104528 ~ 32127935 (+)
G794415 NA non-coding downstream 122913 32163556 ~ 32163962 (+)
G794417 NA non-coding downstream 126737 32167380 ~ 32167653 (+)
G794418 NA non-coding downstream 127061 32167704 ~ 32167973 (+)
G794419 NA non-coding downstream 127339 32167982 ~ 32168294 (+)
G793757 LOC107579696 other upstream 443452 31595996 ~ 31596918 (+)
rbpjb LOC106577485 other upstream 2698167 29248127 ~ 29342203 (+)
taf6l taf6l other upstream 4552847 27480038 ~ 27487523 (+)
G794892 NA other downstream 461204 32501847 ~ 32502355 (+)
G794893 NA other downstream 461753 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 542963 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 2080779 34121422 ~ 34121740 (+)

Expression


Co-expression Network