G794508



Basic Information


Item Value
gene id G794508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32122673 ~ 32124772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU904278
AACAGACGAGTCATATAATCAATTCTCAAAGCTGTACCAGCCCATTTTATTCATTTACACACTTGATCTCACATAAATAACTTTATTTGGGGCTTTCCAATCTGAAAAGCCATTTCCTTGAGTCAAGTCATTCATTGTTATGACCGAACAAAAGCAGTAATGGTTTATTTAAGTGATAAGATTTCATTTTAGTTTTTCTGCCTGTTCCGTGTTATGCGTTGTTCCATTCCTAATAACAATTTGGTATAATGTCAGTAATAATCACATACCTCCACAACAAAAACTGAAAGTGAAGTTTCAGTACACTCATTCAATCATTAAGGAATTCAGACCAGGATTGTTTTGTCATCATGTTTAATACTTAATTTCAGTCATCATTGACTGAAATTAAATATATGTTAGGCCAGAAAGTCAATATTGTGTGAGCAAGTGTTGCTTATTTACACATAATAAGTTGTCAAGTAAATATGGTCAGTGTGTGTCTTCATCACTGTGCTTTCTGTTTCTCCCACTGTTCTGGTGTCAGCGTCTTCTGTTCAAAGGCATGGATCTCTTTTAGCTCTTCAGCCAAGCAGGTGTTCACCATCCTGAAAAAACAAAAATCAGAAACAAGAGTCAACTACAGTCTACTCCACATATCCATTCAAAGTTAGCTCATAACACATATCAGCTCTACCTGCCCACTGTGCCTACCTGTGTCTCGCCAGCAGTGGTTTCCCCTCAAACTGGGGAGACACTATTAGAACTTTGAAGCTGGCAGCACATCTGTTAGGGGATGTGTCTTCAACTTCCACATGCACCGCTCCGATCTCCTTGATTAGTTTGTCACGGATGTGATCTGTTGTAACAGACATACTTTTGGTGTCGCTTTATGATCCAAAACGTTACGGTAGGTTATTTTGTTAAACAAGATGACGAAGCGAAAGGGAAGGTCCACTACCATGTATGTATTGAGAG

Function


NR:

description
BolA-like protein 2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU904278 True 957 lncRNA 0.38 2 32122673 32124772

Neighbor


gene id symbol gene type direction distance location
slx1b LOC106577450 coding downstream 504 32114304 ~ 32122169 (-)
LOC110531919 LOC106577449 coding downstream 19955 32093194 ~ 32102718 (-)
LOC110531916 NA coding downstream 342461 31772967 ~ 31780212 (-)
LOC110531151 NA coding downstream 628179 31369483 ~ 31494494 (-)
LOC118965934 LOC106595224 coding downstream 1082458 31038078 ~ 31040215 (-)
LOC110531923 LOC106577454 coding upstream 53507 32178279 ~ 32201170 (-)
LOC110531924 LOC106577455 coding upstream 92371 32217143 ~ 32220999 (-)
LOC110531926 NA coding upstream 97355 32222074 ~ 32239463 (-)
LOC118966025 NA coding upstream 116235 32241007 ~ 32243922 (-)
LOC110531927 LOC106577456 coding upstream 149482 32274254 ~ 32447901 (-)
G794311 LOC106577443 non-coding downstream 94228 32026071 ~ 32028445 (-)
G794255 NA non-coding downstream 192663 31929797 ~ 31930010 (-)
G794250 NA non-coding downstream 199942 31922373 ~ 31922731 (-)
G794248 NA non-coding downstream 203613 31918733 ~ 31919060 (-)
G794143 NA non-coding downstream 223475 31898984 ~ 31899198 (-)
G794537 NA non-coding upstream 47067 32171839 ~ 32171926 (-)
G794557 NA non-coding upstream 90483 32215255 ~ 32215470 (-)
G794560 NA non-coding upstream 100177 32224949 ~ 32225363 (-)
G794574 NA non-coding upstream 133478 32258250 ~ 32258482 (-)
G793842 NA other downstream 460475 31661239 ~ 31662198 (-)
G793489 NA other downstream 703700 31418455 ~ 31418973 (-)
G793472 NA other downstream 718804 31403482 ~ 31403869 (-)
G792267 NA other downstream 1764709 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1926287 34051059 ~ 34057549 (-)
G797605 NA other upstream 2745183 34869955 ~ 34875879 (-)
G798195 NA other upstream 3229447 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 3261081 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 3367254 35492026 ~ 35521884 (-)

Expression



Co-expression Network