G794415


Basic Information

Item Value
gene id G794415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32163556 ~ 32163962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904167
gtaaatttggatagaaaacactgaagtttctaaaacagtttgaatgatgtctgtgagtataacagaactcatatggcaggcaaaaacctgagaaaaaaatccaaccaggaagtgggaaatctgaggtttgtagtttttcaactcagcccccattgaagatacagggtgatattagttacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaattagaaaaaaaaaatccagaaaatcacattgtaggatttttaatgaatttatttgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904167 True 407 lncRNA 0.35 1 32163556 32163962

Neighbor

gene id symbol gene type direction distance location
zgc:112271 bola2 coding upstream 38803 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 49257 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 84833 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 136342 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 171160 31900060 ~ 31992396 (+)
rpl34 rpl34 coding downstream 330528 32494490 ~ 32498602 (+)
ostc ostc coding downstream 356116 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 870983 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 871489 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 878630 33042592 ~ 33042663 (+)
G794377 NA non-coding upstream 35621 32104528 ~ 32127935 (+)
G794318 NA non-coding upstream 122913 32040370 ~ 32040643 (+)
G794165 NA non-coding upstream 240596 31922734 ~ 31922960 (+)
G794157 NA non-coding upstream 250756 31912592 ~ 31912800 (+)
G794142 NA non-coding upstream 265497 31897844 ~ 31898059 (+)
G794417 NA non-coding downstream 3418 32167380 ~ 32167653 (+)
G794418 NA non-coding downstream 3742 32167704 ~ 32167973 (+)
G794419 NA non-coding downstream 4020 32167982 ~ 32168294 (+)
G794422 NA non-coding downstream 7881 32171843 ~ 32172042 (+)
G794440 NA non-coding downstream 47181 32211143 ~ 32211447 (+)
LOC110531915 LOC106595846 other upstream 407111 31753182 ~ 31757502 (+)
G793757 LOC107579696 other upstream 566638 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 1875393 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 2821353 29248127 ~ 29342203 (+)
G794892 NA other downstream 337885 32501847 ~ 32502355 (+)
G794893 NA other downstream 338434 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 419644 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1957460 34121422 ~ 34121740 (+)
G797056 NA other downstream 2391969 34555931 ~ 34556622 (+)

Expression


Co-expression Network