G794419


Basic Information

Item Value
gene id G794419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32167982 ~ 32168294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904171
cctgtcgggctgtatcaccgcctggtacggcaactgcttcgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgtcacaggaaggccataaagatcatcaaggacaacaaccacccgagccacttcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacaggcaccactaacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904171 True 313 lncRNA 0.55 1 32167982 32168294

Neighbor

gene id symbol gene type direction distance location
zgc:112271 bola2 coding upstream 43229 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 53683 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 89259 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 140768 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 175586 31900060 ~ 31992396 (+)
rpl34 rpl34 coding downstream 326196 32494490 ~ 32498602 (+)
ostc ostc coding downstream 351784 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 866651 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 867157 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 874298 33042592 ~ 33042663 (+)
G794418 NA non-coding upstream 9 32167704 ~ 32167973 (+)
G794417 NA non-coding upstream 329 32167380 ~ 32167653 (+)
G794415 NA non-coding upstream 4020 32163556 ~ 32163962 (+)
G794377 NA non-coding upstream 40047 32104528 ~ 32127935 (+)
G794318 NA non-coding upstream 127339 32040370 ~ 32040643 (+)
G794422 NA non-coding downstream 3549 32171843 ~ 32172042 (+)
G794440 NA non-coding downstream 42849 32211143 ~ 32211447 (+)
G794441 NA non-coding downstream 44227 32212521 ~ 32212764 (+)
G794450 NA non-coding downstream 53289 32221583 ~ 32223556 (+)
G794456 NA non-coding downstream 64010 32232304 ~ 32232527 (+)
LOC110531915 LOC106595846 other upstream 411537 31753182 ~ 31757502 (+)
G793757 LOC107579696 other upstream 571064 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 1879819 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 2825779 29248127 ~ 29342203 (+)
G794892 NA other downstream 333553 32501847 ~ 32502355 (+)
G794893 NA other downstream 334102 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 415312 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1953128 34121422 ~ 34121740 (+)
G797056 NA other downstream 2387637 34555931 ~ 34556622 (+)

Expression


Co-expression Network