G794440


Basic Information

Item Value
gene id G794440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32211143 ~ 32211447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904198
AAAGATTAATGGGGAAGTAGCTGACTTCAAGGAATCCTTTGACTAGTATGCAGCCAACAGCTTCCCACTGCTCACGTCCATAGTCAGGACACAGCAATGGAACTTTATCTATCTAGCCTTCTGAACAGTTTTGAAAAAATGTTTCCCAGAAGGCTGCAAATATGCATCTCTGGTGATTCCTGATGTATCCACTCCGCTCTCGTCAATAAACCTCACCGCTAGAAGACTGTTCACTAGGTTTGGATTTTGGAATTCATGAAGTTTGTCTTTCAGTATGTTGACCATTTGTAATTTCAGAACAAGGG

Function

NR:

description
hypothetical protein cypCar_00035369

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904198 True 305 lncRNA 0.42 1 32211143 32211447

Neighbor

gene id symbol gene type direction distance location
zgc:112271 bola2 coding upstream 86390 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 96844 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 132420 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 183929 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 218747 31900060 ~ 31992396 (+)
rpl34 rpl34 coding downstream 283043 32494490 ~ 32498602 (+)
ostc ostc coding downstream 308631 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 823498 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 824004 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 831145 33042592 ~ 33042663 (+)
G794422 NA non-coding upstream 39101 32171843 ~ 32172042 (+)
G794419 NA non-coding upstream 42849 32167982 ~ 32168294 (+)
G794418 NA non-coding upstream 43170 32167704 ~ 32167973 (+)
G794417 NA non-coding upstream 43490 32167380 ~ 32167653 (+)
G794415 NA non-coding upstream 47181 32163556 ~ 32163962 (+)
G794441 NA non-coding downstream 1074 32212521 ~ 32212764 (+)
G794450 NA non-coding downstream 10136 32221583 ~ 32223556 (+)
G794456 NA non-coding downstream 20857 32232304 ~ 32232527 (+)
G794576 NA non-coding downstream 55344 32266791 ~ 32267041 (+)
G794585 LOC108260976 non-coding downstream 64683 32276130 ~ 32283607 (+)
LOC110531915 LOC106595846 other upstream 454698 31753182 ~ 31757502 (+)
G793757 LOC107579696 other upstream 614225 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 1922980 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 2868940 29248127 ~ 29342203 (+)
G794892 NA other downstream 290400 32501847 ~ 32502355 (+)
G794893 NA other downstream 290949 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 372159 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1909975 34121422 ~ 34121740 (+)
G797056 NA other downstream 2344484 34555931 ~ 34556622 (+)

Expression


Co-expression Network