Gene
RNA
| Item | Value |
|---|---|
| gene id | G794557 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 32215255 ~ 32215470 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU904329 | True | 216 | lncRNA | 0.45 | 1 | 32215255 | 32215470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531923 | LOC106577454 | coding | downstream | 14085 | 32178279 ~ 32201170 (-) |
| slx1b | LOC106577450 | coding | downstream | 93086 | 32114304 ~ 32122169 (-) |
| LOC110531919 | LOC106577449 | coding | downstream | 112537 | 32093194 ~ 32102718 (-) |
| LOC110531916 | NA | coding | downstream | 435043 | 31772967 ~ 31780212 (-) |
| LOC110531151 | NA | coding | downstream | 720761 | 31369483 ~ 31494494 (-) |
| LOC110531924 | LOC106577455 | coding | upstream | 1673 | 32217143 ~ 32220999 (-) |
| LOC110531926 | NA | coding | upstream | 6657 | 32222074 ~ 32239463 (-) |
| LOC118966025 | NA | coding | upstream | 25537 | 32241007 ~ 32243922 (-) |
| LOC110531927 | LOC106577456 | coding | upstream | 58784 | 32274254 ~ 32447901 (-) |
| LOC118966026 | NA | coding | upstream | 297621 | 32513091 ~ 32513996 (-) |
| G794537 | NA | non-coding | downstream | 43329 | 32171839 ~ 32171926 (-) |
| G794508 | NA | non-coding | downstream | 90483 | 32122673 ~ 32124772 (-) |
| G794311 | LOC106577443 | non-coding | downstream | 186810 | 32026071 ~ 32028445 (-) |
| G794255 | NA | non-coding | downstream | 285245 | 31929797 ~ 31930010 (-) |
| G794250 | NA | non-coding | downstream | 292524 | 31922373 ~ 31922731 (-) |
| G794560 | NA | non-coding | upstream | 9479 | 32224949 ~ 32225363 (-) |
| G794574 | NA | non-coding | upstream | 42780 | 32258250 ~ 32258482 (-) |
| G794579 | NA | non-coding | upstream | 51919 | 32267389 ~ 32267630 (-) |
| G794582 | NA | non-coding | upstream | 54030 | 32269500 ~ 32269837 (-) |
| G793842 | NA | other | downstream | 553057 | 31661239 ~ 31662198 (-) |
| G793489 | NA | other | downstream | 796282 | 31418455 ~ 31418973 (-) |
| G793472 | NA | other | downstream | 811386 | 31403482 ~ 31403869 (-) |
| G792267 | NA | other | downstream | 1857291 | 30315310 ~ 30357964 (-) |
| G796733 | rl32 | other | upstream | 1835589 | 34051059 ~ 34057549 (-) |
| G797605 | NA | other | upstream | 2654485 | 34869955 ~ 34875879 (-) |
| G798195 | NA | other | upstream | 3138749 | 35354219 ~ 35354675 (-) |
| LOC110531966 | LOC106571884 | other | upstream | 3170383 | 35381661 ~ 35400349 (-) |
| LOC118966032 | LOC106571870 | other | upstream | 3276556 | 35492026 ~ 35521884 (-) |
