G794456


Basic Information

Item Value
gene id G794456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32232304 ~ 32232527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904221
gtcgtattctctcggggcagaaatctcagagatcaattggtaaactctgatttaccaccccaagatattcctgaacaacgtctatttgcgcccctactggatggaaattacaaatgtaatggctgtgctcaatgcaatggcacttataaatgtagatccttcaaacacccacaaacagggaaatcgatcccaataaaaggtgttattacgtgctccactaaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904221 True 224 lncRNA 0.42 1 32232304 32232527

Neighbor

gene id symbol gene type direction distance location
zgc:112271 bola2 coding upstream 107551 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 118005 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 153581 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 205090 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 239908 31900060 ~ 31992396 (+)
rpl34 rpl34 coding downstream 261963 32494490 ~ 32498602 (+)
ostc ostc coding downstream 287551 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 802418 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 802924 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 810065 33042592 ~ 33042663 (+)
G794450 NA non-coding upstream 8748 32221583 ~ 32223556 (+)
G794441 NA non-coding upstream 19540 32212521 ~ 32212764 (+)
G794440 NA non-coding upstream 20857 32211143 ~ 32211447 (+)
G794422 NA non-coding upstream 60262 32171843 ~ 32172042 (+)
G794419 NA non-coding upstream 64010 32167982 ~ 32168294 (+)
G794576 NA non-coding downstream 34264 32266791 ~ 32267041 (+)
G794585 LOC108260976 non-coding downstream 43603 32276130 ~ 32283607 (+)
G794847 NA non-coding downstream 232744 32465271 ~ 32465573 (+)
G794853 NA non-coding downstream 235375 32467902 ~ 32468362 (+)
G794860 NA non-coding downstream 243593 32476120 ~ 32476323 (+)
LOC110531915 LOC106595846 other upstream 475859 31753182 ~ 31757502 (+)
G793757 LOC107579696 other upstream 635386 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 1944141 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 2890101 29248127 ~ 29342203 (+)
G794892 NA other downstream 269320 32501847 ~ 32502355 (+)
G794893 NA other downstream 269869 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 351079 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1888895 34121422 ~ 34121740 (+)
G797056 NA other downstream 2323404 34555931 ~ 34556622 (+)

Expression


Co-expression Network