G794579



Basic Information


Item Value
gene id G794579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32267389 ~ 32267630 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU904358
gtttgtattctgccatattctcagtcaccttgccatggttaaatgcggtggtttgtgctttcagttttgcgcgaatgctgccatctatccaacATCTCCtgtacacttcctgataaactcaatCACCGTTTCAGTATATTCGTCGATATTATTCTTAgaagctacccggaacatatcccagtccgcttgatcaaaacaatcttgaagcgtggattccgattgatCATAGTCCTTAGCACGAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU904358 True 242 lncRNA 0.43 1 32267389 32267630

Neighbor


gene id symbol gene type direction distance location
LOC118966025 NA coding downstream 23467 32241007 ~ 32243922 (-)
LOC110531926 NA coding downstream 27926 32222074 ~ 32239463 (-)
LOC110531924 LOC106577455 coding downstream 46390 32217143 ~ 32220999 (-)
LOC110531923 LOC106577454 coding downstream 66219 32178279 ~ 32201170 (-)
slx1b LOC106577450 coding downstream 145220 32114304 ~ 32122169 (-)
LOC110531927 LOC106577456 coding upstream 6624 32274254 ~ 32447901 (-)
LOC118966026 NA coding upstream 245461 32513091 ~ 32513996 (-)
LOC110531930 NA coding upstream 248439 32516069 ~ 32520096 (-)
etnppl LOC106577459 coding upstream 287729 32555359 ~ 32594324 (-)
LOC110531933 NA coding upstream 331737 32599367 ~ 32956074 (-)
G794574 NA non-coding downstream 8907 32258250 ~ 32258482 (-)
G794560 NA non-coding downstream 42026 32224949 ~ 32225363 (-)
G794557 NA non-coding downstream 51919 32215255 ~ 32215470 (-)
G794537 NA non-coding downstream 95463 32171839 ~ 32171926 (-)
G794582 NA non-coding upstream 1870 32269500 ~ 32269837 (-)
G794720 NA non-coding upstream 4179 32271809 ~ 32329256 (-)
G794863 NA non-coding upstream 208606 32476236 ~ 32476451 (-)
G794876 NA non-coding upstream 213396 32481026 ~ 32488033 (-)
G794879 NA non-coding upstream 221165 32488795 ~ 32489008 (-)
G794311 LOC106577443 other downstream 239121 32026071 ~ 32028445 (-)
G793842 NA other downstream 605191 31661239 ~ 31662198 (-)
G793489 NA other downstream 848416 31418455 ~ 31418973 (-)
G793472 NA other downstream 863520 31403482 ~ 31403869 (-)
G792267 NA other downstream 1909425 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1783429 34051059 ~ 34057549 (-)
G797605 NA other upstream 2602325 34869955 ~ 34875879 (-)
G798195 NA other upstream 3086589 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 3118223 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 3224396 35492026 ~ 35521884 (-)

Expression



Co-expression Network