G794720


Basic Information

Item Value
gene id G794720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32271809 ~ 32329256 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904500
gacaagttataagataaataactgccttagtggagcatgtgataacacctttgattgggatctgtttccctgtttgggggtgtttgaaggatctacatttgtaagtgccattgcattgagtgCAGCCATTGCTCTTGTAGTTTCCATCCGATAGAGGCGCAAATAGACATTGTGCAGGGATattttggggtggtaaatcagtgtttaccaattgatctctgagatttctgccccactagaatacgaccaagggagggtccgaaaacacattaccggCACTGTCATCGGatcttagaatgtgccaatgtttgtgaacgatacccttaatttgttcagagcactttgaatgGTGGTGTCTATTATcatactattttttttaaactatcaaATATGAAGTCAACCTCATACACTTCAAGGATTGactattataataattgattggTTTTCTGGAGACTTCCCCTGTGTGTTTGCCCCATTTATGCATTGTTTGCTGGTATAAAGTATGAGGGCTTTAGATACCACATTGCCTCCTGATAGTCTACAAGTATGCTACATTATACTGatgctatttatttatttgtttattaccACACCTGTCTTTAAAGTGTAGGCGCTAAAGTCAAGAGGCAGATTGGGCTATCACTCCCAATGGATCATTTCTTCTCCCATGCACACAGGCGCACACATGAAAACACAAATTAGAAAGCCAAGATATATATTTTAAGCACACCCTTATTCACATTCAGATAATAAGATAAGATGTTttccacacacacttttttttcatCTTCGCTAAACAGTGCCCATTGCCTTATCCTGTAGTACGATCCAGAGAAAAAGAGAACTGTGTCTGtggctagaatacagtatacaagtCAGGCATATTCTGTCATTGAGTCCCTCCTACCCACACGCTCATTAGTCTTGCCTCACCTCACCACTTGTTCTTACCCTTTTTTTCTTAGGTGGGTGTCGATTGCTTGAGTTCACACTTCCCCAACCTTAGAGAAAGGTTGTTCATGTTGCGCTTTTCATTCATCCTCACTTTTCCAGCTTCCCTTATGTCTGCTGTCACAGGTGCTGTATGCATAAAGTATCCTGAAAGGCTCCTGTCAAAGAATCTTGTATGAGCAAAGGCAAAGTTGTATGGAATATTTGTGAACAAGCATGAATGATGAGCTAAAAATGCAAAAACAATCGGTTTAGCATGTGAAACACATTGAGTGCAGATTATAGGGTATAAGTCGACCACGAATACACATTTTTGCACTGTAAATGTAAATGTCTTTATTTTATTGGTGTTAATGtaagatttatttatttaaggtGTACATAATATACAGACAAATTAACTATATAATCTATATGTGTAAAATAACTATGTAAAACTCTACTGTAAAACAAAGTATCTATTACAACAATGAATAAAGGTAACAAAGAAATGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904500 True 1446 lncRNA 0.38 2 32271809 32329256

Neighbor

gene id symbol gene type direction distance location
LOC118966025 NA coding downstream 27887 32241007 ~ 32243922 (-)
LOC110531926 NA coding downstream 32346 32222074 ~ 32239463 (-)
LOC110531924 LOC106577455 coding downstream 50810 32217143 ~ 32220999 (-)
LOC110531923 LOC106577454 coding downstream 70639 32178279 ~ 32201170 (-)
slx1b LOC106577450 coding downstream 149640 32114304 ~ 32122169 (-)
LOC118966026 NA coding upstream 183835 32513091 ~ 32513996 (-)
LOC110531930 NA coding upstream 186813 32516069 ~ 32520096 (-)
etnppl LOC106577459 coding upstream 226103 32555359 ~ 32594324 (-)
LOC110531933 NA coding upstream 270111 32599367 ~ 32956074 (-)
trnap-agg-9 NA coding upstream 700481 33029737 ~ 33029808 (-)
G794582 NA non-coding downstream 1972 32269500 ~ 32269837 (-)
G794579 NA non-coding downstream 4179 32267389 ~ 32267630 (-)
G794574 NA non-coding downstream 13327 32258250 ~ 32258482 (-)
G794560 NA non-coding downstream 46446 32224949 ~ 32225363 (-)
G794863 NA non-coding upstream 146980 32476236 ~ 32476451 (-)
G794876 NA non-coding upstream 151770 32481026 ~ 32488033 (-)
G794879 NA non-coding upstream 159539 32488795 ~ 32489008 (-)
G794880 NA non-coding upstream 159837 32489093 ~ 32489515 (-)
G795168 NA non-coding upstream 164203 32493459 ~ 32493745 (-)
G794311 LOC106577443 other downstream 243541 32026071 ~ 32028445 (-)
G793842 NA other downstream 609611 31661239 ~ 31662198 (-)
G793489 NA other downstream 852836 31418455 ~ 31418973 (-)
G793472 NA other downstream 867940 31403482 ~ 31403869 (-)
G792267 NA other downstream 1913845 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1721803 34051059 ~ 34057549 (-)
G797605 NA other upstream 2540699 34869955 ~ 34875879 (-)
G798195 NA other upstream 3024963 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 3056597 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 3162770 35492026 ~ 35521884 (-)

Expression


Co-expression Network