G794853


Basic Information

Item Value
gene id G794853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32467902 ~ 32468362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904637
tttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccacattttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaatgttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904637 True 461 lncRNA 0.41 1 32467902 32468362

Neighbor

gene id symbol gene type direction distance location
zgc:112271 bola2 coding upstream 343149 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 353603 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 389179 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 440688 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 475506 31900060 ~ 31992396 (+)
rpl34 rpl34 coding downstream 26128 32494490 ~ 32498602 (+)
ostc ostc coding downstream 51716 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 566583 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 567089 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 574230 33042592 ~ 33042663 (+)
G794847 NA non-coding upstream 2329 32465271 ~ 32465573 (+)
G794585 LOC108260976 non-coding upstream 184295 32276130 ~ 32283607 (+)
G794576 NA non-coding upstream 200861 32266791 ~ 32267041 (+)
G794456 NA non-coding upstream 235375 32232304 ~ 32232527 (+)
G794450 NA non-coding upstream 244346 32221583 ~ 32223556 (+)
G794860 NA non-coding downstream 7758 32476120 ~ 32476323 (+)
G794871 NA non-coding downstream 12307 32480669 ~ 32480901 (+)
G794890 NA non-coding downstream 25672 32494034 ~ 32494246 (+)
G794894 NA non-coding downstream 35396 32503758 ~ 32504005 (+)
G794912 NA non-coding downstream 72805 32541167 ~ 32542273 (+)
LOC110531915 LOC106595846 other upstream 711457 31753182 ~ 31757502 (+)
G793757 LOC107579696 other upstream 870984 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 2179739 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 3125699 29248127 ~ 29342203 (+)
G794892 NA other downstream 33485 32501847 ~ 32502355 (+)
G794893 NA other downstream 34034 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 115244 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1653060 34121422 ~ 34121740 (+)
G797056 NA other downstream 2087569 34555931 ~ 34556622 (+)

Expression


Co-expression Network