G794876


Basic Information

Item Value
gene id G794876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32481026 ~ 32488033 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904669
atgcaggtgaccagcctactgctattacattgctataactgagacaacgtattttcacagtaaaacatgttaggtcccatacaggatagctcccacacccacacacacagcacacacacattacacacactaactgccgaggacacacagataagacatacacccacacattgggaggaagagacagccttgacttgcagaaaccagcgcacacacctaatctccttttttagctgaacattgtgtgacaaGGAACGGCACgacaagactcagagggatgacggacggcccaacaggaCCAACCAGAAGACCAGAACTTCTAGACTCAACCTActttctgtactgtatataacatacATGCACTCTGTTATCGGGGcttcttttctgctggttccttaagaaccgaatgaaatgggcccgtatacgttgtaccagatatctttactcataattaaactgtcacttgtcatacaatttaccaccttgtctgaatcgatccttgaccggctcaccctcct
>TU904678
AGGTTAGGAAGAGATGTCAAGCCCAGAGCTGTCCTAGACCTGTGAAACATCAAAGGGTGTTGGCGGATCGCTGCCCTAAAAGAGTTCCAGACTGTAAACTTGTTATTGAAAGTTCACTTGAAATGCTTTGGTATTGTATTTGTTTGAAATGTTAAGATGTTATTTCTACAGTGAAAGCTGAGTTGCTGAGAATCCCTTGTTTGAAAAGTAACAGTATGTTGGATTATTGTTTCAGAGTCTATGTTGATTCAGTTGGTGTAgtgtaaggaagtgctatttcttatgcaggtgaccagcctactgctattacattgctataactgagacaacgtattttcacagtaaaacatgttaggtcccatacaggatagctcccacacccacacacacagcacacacacattacacacactaactgccgaggacacacagataagacatacacccacacattgggaggaagagacagccttgacttgcagaaaccagcgcacacacctaatctccttttttagctgaacattgtgtgacaaGGAACGGCACgacaagactcagagggatgacggacggcccaacaggaCCAACCAGAAGACCAGAACTTCTAGACTCAACCTActttctgtactgtatataacatacATGCACTCTGTTATCGGGGcttcttttctgctggttccttaagaaccgaatgaaatgggcccgtatacgttgtaccagatatctttactcataattaaactgtcacttgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904669 False 518 lncRNA 0.46 2 32481026 32487751
TU904678 True 751 lncRNA 0.43 2 32481075 32488033

Neighbor

gene id symbol gene type direction distance location
LOC110531927 LOC106577456 coding downstream 33125 32274254 ~ 32447901 (-)
LOC118966025 NA coding downstream 237104 32241007 ~ 32243922 (-)
LOC110531926 NA coding downstream 241563 32222074 ~ 32239463 (-)
LOC110531924 LOC106577455 coding downstream 260027 32217143 ~ 32220999 (-)
LOC110531923 LOC106577454 coding downstream 279856 32178279 ~ 32201170 (-)
LOC118966026 NA coding upstream 25058 32513091 ~ 32513996 (-)
LOC110531930 NA coding upstream 28036 32516069 ~ 32520096 (-)
etnppl LOC106577459 coding upstream 67326 32555359 ~ 32594324 (-)
LOC110531933 NA coding upstream 111334 32599367 ~ 32956074 (-)
trnap-agg-9 NA coding upstream 541704 33029737 ~ 33029808 (-)
G794863 NA non-coding downstream 4575 32476236 ~ 32476451 (-)
G794720 NA non-coding downstream 151770 32271809 ~ 32329256 (-)
G794582 NA non-coding downstream 211189 32269500 ~ 32269837 (-)
G794579 NA non-coding downstream 213396 32267389 ~ 32267630 (-)
G794574 NA non-coding downstream 222544 32258250 ~ 32258482 (-)
G794879 NA non-coding upstream 762 32488795 ~ 32489008 (-)
G794880 NA non-coding upstream 1060 32489093 ~ 32489515 (-)
G795168 NA non-coding upstream 5426 32493459 ~ 32493745 (-)
G795175 rpl34 non-coding upstream 6437 32494470 ~ 32498929 (-)
G795177 NA non-coding upstream 13708 32501741 ~ 32502369 (-)
G794311 LOC106577443 other downstream 452758 32026071 ~ 32028445 (-)
G793842 NA other downstream 818828 31661239 ~ 31662198 (-)
G793489 NA other downstream 1062053 31418455 ~ 31418973 (-)
G793472 NA other downstream 1077157 31403482 ~ 31403869 (-)
G792267 NA other downstream 2123062 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1563026 34051059 ~ 34057549 (-)
G797605 NA other upstream 2381922 34869955 ~ 34875879 (-)
G798195 NA other upstream 2866186 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2897820 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 3003993 35492026 ~ 35521884 (-)

Expression


Co-expression Network