Gene
RNA
| Item | Value |
|---|---|
| gene id | G794880 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 32489093 ~ 32489515 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: hephaestin-like protein 1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU904688 | True | 423 | lncRNA | 0.46 | 1 | 32489093 | 32489515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531927 | LOC106577456 | coding | downstream | 41192 | 32274254 ~ 32447901 (-) |
| LOC118966025 | NA | coding | downstream | 245171 | 32241007 ~ 32243922 (-) |
| LOC110531926 | NA | coding | downstream | 249630 | 32222074 ~ 32239463 (-) |
| LOC110531924 | LOC106577455 | coding | downstream | 268094 | 32217143 ~ 32220999 (-) |
| LOC110531923 | LOC106577454 | coding | downstream | 287923 | 32178279 ~ 32201170 (-) |
| LOC118966026 | NA | coding | upstream | 23576 | 32513091 ~ 32513996 (-) |
| LOC110531930 | NA | coding | upstream | 26554 | 32516069 ~ 32520096 (-) |
| etnppl | LOC106577459 | coding | upstream | 65844 | 32555359 ~ 32594324 (-) |
| LOC110531933 | NA | coding | upstream | 109852 | 32599367 ~ 32956074 (-) |
| trnap-agg-9 | NA | coding | upstream | 540222 | 33029737 ~ 33029808 (-) |
| G794879 | NA | non-coding | downstream | 85 | 32488795 ~ 32489008 (-) |
| G794876 | NA | non-coding | downstream | 1060 | 32481026 ~ 32488033 (-) |
| G794863 | NA | non-coding | downstream | 12642 | 32476236 ~ 32476451 (-) |
| G794720 | NA | non-coding | downstream | 159837 | 32271809 ~ 32329256 (-) |
| G794582 | NA | non-coding | downstream | 219256 | 32269500 ~ 32269837 (-) |
| G795168 | NA | non-coding | upstream | 3944 | 32493459 ~ 32493745 (-) |
| G795175 | rpl34 | non-coding | upstream | 4955 | 32494470 ~ 32498929 (-) |
| G795177 | NA | non-coding | upstream | 12226 | 32501741 ~ 32502369 (-) |
| G795171 | NA | non-coding | upstream | 23581 | 32513096 ~ 32520039 (-) |
| G795170 | NA | non-coding | upstream | 46995 | 32536510 ~ 32549007 (-) |
| G794311 | LOC106577443 | other | downstream | 460825 | 32026071 ~ 32028445 (-) |
| G793842 | NA | other | downstream | 826895 | 31661239 ~ 31662198 (-) |
| G793489 | NA | other | downstream | 1070120 | 31418455 ~ 31418973 (-) |
| G793472 | NA | other | downstream | 1085224 | 31403482 ~ 31403869 (-) |
| G792267 | NA | other | downstream | 2131129 | 30315310 ~ 30357964 (-) |
| G796733 | rl32 | other | upstream | 1561544 | 34051059 ~ 34057549 (-) |
| G797605 | NA | other | upstream | 2380440 | 34869955 ~ 34875879 (-) |
| G798195 | NA | other | upstream | 2864704 | 35354219 ~ 35354675 (-) |
| LOC110531966 | LOC106571884 | other | upstream | 2896338 | 35381661 ~ 35400349 (-) |
| LOC118966032 | LOC106571870 | other | upstream | 3002511 | 35492026 ~ 35521884 (-) |
