G794890


Basic Information

Item Value
gene id G794890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32494034 ~ 32494246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU904698
cagactgttaaatagccatcactaataCAGAGACAGCCATccatttacatttgtgtgtattaggtagttgttgtgaaattgttcattacttgttagatattactgcactgtcggaactagaagcacaagcgtttcactacactcgcgttaacatctgccaaccatgtgtatgtgaccacaaaatttggatttgatttgatagttggATGGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904698 True 213 lncRNA 0.39 1 32494034 32494246

Neighbor

gene id symbol gene type direction distance location
zgc:112271 bola2 coding upstream 369281 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 379735 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 415311 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 466820 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 501638 31900060 ~ 31992396 (+)
rpl34 rpl34 coding downstream 244 32494490 ~ 32498602 (+)
ostc ostc coding downstream 25832 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 540699 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 541205 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 548346 33042592 ~ 33042663 (+)
G794871 NA non-coding upstream 13133 32480669 ~ 32480901 (+)
G794860 NA non-coding upstream 17711 32476120 ~ 32476323 (+)
G794853 NA non-coding upstream 25672 32467902 ~ 32468362 (+)
G794847 NA non-coding upstream 28461 32465271 ~ 32465573 (+)
G794585 LOC108260976 non-coding upstream 210427 32276130 ~ 32283607 (+)
G794894 NA non-coding downstream 9512 32503758 ~ 32504005 (+)
G794912 NA non-coding downstream 46921 32541167 ~ 32542273 (+)
G794884 NA non-coding downstream 67271 32561517 ~ 32562743 (+)
G794932 NA non-coding downstream 133312 32627558 ~ 32651727 (+)
G794998 NA non-coding downstream 226374 32720620 ~ 32720875 (+)
LOC110531915 LOC106595846 other upstream 737589 31753182 ~ 31757502 (+)
G793757 LOC107579696 other upstream 897116 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 2205871 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 3151831 29248127 ~ 29342203 (+)
G794892 NA other downstream 7601 32501847 ~ 32502355 (+)
G794893 NA other downstream 8150 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 89360 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1627176 34121422 ~ 34121740 (+)
G797056 NA other downstream 2061685 34555931 ~ 34556622 (+)

Expression


Co-expression Network