G795177



Basic Information


Item Value
gene id G795177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32501741 ~ 32502369 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU905054
gccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcttcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctcctttggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgggcttttaacagacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacgtctggacagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaa

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU905054 True 629 lncRNA 0.42 1 32501741 32502369

Neighbor


gene id symbol gene type direction distance location
LOC110531927 LOC106577456 coding downstream 53840 32274254 ~ 32447901 (-)
LOC118966025 NA coding downstream 257819 32241007 ~ 32243922 (-)
LOC110531926 NA coding downstream 262278 32222074 ~ 32239463 (-)
LOC110531924 LOC106577455 coding downstream 280742 32217143 ~ 32220999 (-)
LOC110531923 LOC106577454 coding downstream 300571 32178279 ~ 32201170 (-)
LOC118966026 NA coding upstream 10722 32513091 ~ 32513996 (-)
LOC110531930 NA coding upstream 13700 32516069 ~ 32520096 (-)
etnppl LOC106577459 coding upstream 52990 32555359 ~ 32594324 (-)
LOC110531933 NA coding upstream 96998 32599367 ~ 32956074 (-)
trnap-agg-9 NA coding upstream 527368 33029737 ~ 33029808 (-)
G795175 rpl34 non-coding downstream 2812 32494470 ~ 32498929 (-)
G795168 NA non-coding downstream 7996 32493459 ~ 32493745 (-)
G794880 NA non-coding downstream 12226 32489093 ~ 32489515 (-)
G794879 NA non-coding downstream 12733 32488795 ~ 32489008 (-)
G794876 NA non-coding downstream 13708 32481026 ~ 32488033 (-)
G795171 NA non-coding upstream 10727 32513096 ~ 32520039 (-)
G795170 NA non-coding upstream 34141 32536510 ~ 32549007 (-)
G795182 NA non-coding upstream 38797 32541166 ~ 32542179 (-)
G795188 NA non-coding upstream 92001 32594370 ~ 32594623 (-)
G795198 NA non-coding upstream 125373 32627742 ~ 32651703 (-)
G794311 LOC106577443 other downstream 473473 32026071 ~ 32028445 (-)
G793842 NA other downstream 839543 31661239 ~ 31662198 (-)
G793489 NA other downstream 1082768 31418455 ~ 31418973 (-)
G793472 NA other downstream 1097872 31403482 ~ 31403869 (-)
G792267 NA other downstream 2143777 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1548690 34051059 ~ 34057549 (-)
G797605 NA other upstream 2367586 34869955 ~ 34875879 (-)
G798195 NA other upstream 2851850 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2883484 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2989657 35492026 ~ 35521884 (-)

Expression



Co-expression Network