XLOC_027072 (ppp1r3aa)


Basic Information

Item Value
gene id XLOC_027072
gene name ppp1r3aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 6572364 ~ 6580610 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053367
taTCTCCAGGGTCAGAAAAGTTCACCAGACGACATGAACGGATCAAAGCAGCCCACGTCCATCACACACTAGTGACCAGGAAGACAAGCATAGTTCAGTAGCCAGCTATATTTAAGCCTGGCAACCACACAATGTTCAGCCGTAACCCGATGCTCCCTGCCGAGTCACGTTGCGAGTGAATTGGCTACTAATGTTCAGCCTAAACCAGCAGCATGTCTGTGGAAGAGACAACCTGCAACCTGGAGCCTCCAAACTGCAAGGACTGGATCATGAAAAACCAGGAGGACAAGATGGAGCAGGTTGCAGAGGATGAATCTGAAGAGGAGGAACCGGAGCCTCCATTGATAGCCCTACGAAGGAAGGTTTCATTTGCGGATGCATTTGGTTTGGACTTGGTTTCAGTGAAGGAATATGACAACCGGGACTCGTCGGAGGGTGGGGAATACTACATCTCATGTTTGTTCACCATTGCAGATTTGATCCTGGATATGGAGGCGAAACTTCAGCAGCAGAAGTTGGAGTTGGAGCGGTTTGAGCTGCTCCCTGGATCCACTACAATCCGAGGAATCGTCCGAGTGCTTAACTTATGCTTCCACAAATCAGTTTATGTCCGTGTTACACTGGACGGCTGGCAGAGTCACTTTGAGCTGATGGCGGAGTATGTGCCCGGGTCCAGTGATGGCCAAACCGACTGCTTTTGTTTTCACCTCAATTTGATGCCTCCATTCCCGGTCGAAGGGCTGCGTGTTGAGTTCTGTCTGCGGTACGAGAGCGCTGTTGGGACCTTCTGGGCCAGCAATGGAGGGACAAACTACATCATGTTCTGCTATCAAAGACGAAGGAGCAATTTTAAAGAGCACCCAAGGGAAAATGAGAAGGAGATTGAAAAGGAGAAGGTAGAGGAGGGTCTGCATAAAGGTATCAGGAGCTGCCTTAAAGCAAACAGtaaaaactacACAGAAGCGACAGCTGCAGAGGCGAGTGGAGGAATCCCAGAGCAAGCCACAGCCAAGGTTGGGCGCAATAGGAACAAAACAGAAGAAGAAGCAGGGATCACTTCCTGCAAATCCCTTAAGGACTGCTGCAAAACCCTGGTGGACCGTCGTAGGAAGCGTCAAGCTGCTCGTCTGGCACATGTTCAAAGCTACTTTGCTCAGAAAGCAACAGAAACCCAGATGGGATGTAATTCCATCACAGATGAAAGTTCAACCTCCATCCCAAGGCTGAGTATACAAAGCAGAACCGACAACCAACAGGGATTCGGCATGGACACACCACCAATACTAATGTACCACCAGATTCCTTTGCTTTCTCTAGACTGGGGGAGTACCTCAACAACACCTCCCCAAGTGAACCCCCCAAACACAGAGAGCCAGCAAGTTGAAGATCACCAAGCTGAGTTGAGTTTTGATGCCTTTCTGAAGGGCTCTGATACGGCAATCCCTCACAGTGATATGCAGGATCAGGCATGTGCTTCTCCAGAGTCACTTGACCATTCTGAAGTTTCAGCTTCAAGGGACAGAGTCGGAGGATTGGAGGACAGAGAAGCTTGGAAAAATTACAGTCAAGAGTCTGCTAAGAGGAGAACAACAAATATCATCCAATCTGATGCCACACAACAAGGAAAGGATCCGATCACAAGTCTTTCTAGTGATCAAGTTGTGAATTACCAGTTAGTAAAAGAACCAATGGTCACTACTCTACCATGGTCTGTTTTAGATTCAAGGGACCAAATTGTAGTCCCAATGGAAGATAGAGGAGCGGAGAAAGATTATAGTCAAGGGACTGATGACAGAGGAGCAATAGAAACCATAAAATCTGACCCCACAGTGCAAGTAAAAGATCTGAGTACGAGTCTCTCTAGTGATCAAGTTGTGGATTATCAGTTAGCAAAAGAACCAAGCATCACTACCGTACCCTGCTCTGTTTTACCTTCAAGGGACCAAATTGTAGTCCCGATGGAGGATAGAGAAGCTGAAAAAGGCTACATTCAAGGGTCTGCTGACAGGAGAGCAATAGAAACCATAAAATCTGATCCCACGGAGCAAGGAAAGAATCTGAGCACAGGTCTTTCGAGTGATCAAGTTGTTGAGGATTACCAGTTAGCGAAAGAACCAAGTGTCACTGCCATACCCTGCTCTGTTTTAGCTTCAAGGGACAAAAATATGATCCCAATAGAGGATAGAGGAGCTAAGAAAGATAATAGTCAATGGTCTGATGACAAGAGAGCAATAGAAAGTATAAAATCTGATCCCACAGACCAAAGAAAGGATCTGAGCTTGAGTCTTTCGAGTTATGAAGTTGTGGATCATCAGTTAGTAAAAGAACCAAGCGTCACTATCGTACCATGCTCAGTTTTAGCTTCAAGGGAACAAATTGAAGTCCCAATGGAGGATAGAGAAGCTGAGAAAAAATGTAGTCAATGGTCTGCTGACAGGGGAGCAATAGAAATCATAACATCTGATCCTACAGAGCAAGGGAAGCAACCGAGCACAAGTCTTTCAAGTGATCAAGTTGTCGAGGATTACCAGTTAGTAAAAGAACCAAGCGTCACTGCCATACCCTGCTCTTTTTTAGCTTCAAGGGACAAAAATGTTGTCCCAATAGAGGATGGAGGAGCTGAAAAAGGCTACATTCTAGGGTCTGGTGACAGGAGAGCAATAGAAATCATAAAATCTGATCCCACAGAGCAAGGAAAGGATTTGATCACACGTCTTTCTAATGATCAGATTATGAATTACCACTTAGGTGAAGAACCAAGCGCCACTACCGTACCATGCTCGGTTTTAGCTTCAGGGGACCAAATTGAAGTCCCAATGGTGAATAAAGGAGATGAGAAAAAATATAGTCAATGGTCTGCTGACAGAAGAGCAATAGAAACCATAAAATCTGATCCTACAGAGCAAGGAAAGGATCGTAGCACAATTCTTTCGAGTGATCAAGTTGTTGTGGATTGCCAGTTAGTAAAAGAACCAAGTGTCACTGCCATACCCTGCTCTTTTTTAGCTTTAAGAAACAAAAATGTCCCAATAGAGGATAGTGGAGCTGAAAATGGCTACATTCAAGGGTCTGGTGACAGGAGAGCAATTGAAATCATAAAATCTGATCCCACAGAGAAAGGAAAGAATCTGAGCACAAGTCTTACTAGAGATCAAGATGTGGATTACCGGTTAGTAAAAGAATCAAAAGCCACTACCGTACCGTGCTTTGCTTTAGCTTCAAGGGACCAAATCGAAGTCCCAGTGGAGGAACTAGAAGCTGTGAAAAATGATAGTCAATGGTCTGCTGACAGGATGGCAATAGAAGTCATAAAATCTGAACCCACAGAGCAAGGAAAGGATCTGAGCACAGGTCTTTCTAGTGATCGAGTTGTAGATTACCAGTTAGTTAAAGAACCAAGGGTCACTACAGTACCATGCTCTGTTCTGGGATCAGAGCCAGACAGGCTGGAAAGAGAGTTAGAGGCATCTCGTGACTGCCAAACGCCACATCATGAGCTCACAAGTGGATTTTTGAGTCAAGACACGACCAAGGCGAGCCCAGGGGATGAAACTGGAAtcgcgcatgacacagagactcAGAATTCAGAAGCAGGAGATGGAATCTCACCTGAAGAATGCACGGGCAGCTCCGACACCTCAAAGgttaaagaaaacacacacagggCGGTCAAAGACATCCTGACATTTACGGGGATCAGAGACGTGCCACTCACAAATAGACAGGCCGAGGGATCTTCTCCAAAGAGGAAGGTTATAAATATAGACGATAGCGAGGAGCAGGTGGAAATGAGGTGGTTTTATACAGAACTACATGAAGAGGACGCGGAAAGCAGTAGAAAAGGACAAGATGAAACAACTATGGATCACAGTGCAGAAATACAGAGTGTTTCATCGTGCGCGAGCGAGGCGTTTAATGAGAACGAATTATGCACGATGAACAAGAATCTTCACAAAGACAATTCAGAGCTACAGAAAAGCGAAGAGAGGCGGTTTGAGGCAAATGAAGGACTTAAAATAAAGGAGCAACTCAACGAGACGACTATTGAAGCAGCTAAAGGAGGTGAAGAGGATGAAATGTGTTCAGAAAGCAAACGAGAGCTCATTGAGGACTCCCGAGCCATCGGTGATAATTGCACAGATGAAGACCTTACCAGCAAAGTTACATATCTGACAGATAGCACTGACCTTCCCAAACACATCCCTCAGACAACATCTATAAAGGACAGAGAGGTCAATTCTCAagatgaagagtttgagcttggGAAAAGCCTCAATGGTAGTAGCAACAGGCTGTTTTCATGGTGGCAGGAGTTCAACTCACTGGGTCACATGGCCAAGGCTTTACTGTATGCTATTCTGTTTGTGATCTTCATAACAACATATCTTTGTGACATGCCAACCTGCTTGGCTCTCTATTTGTTTTCTCTGTGCTGGTGGTGCAGCCAGGGCATGAAACAGCGTCTGGATGGGGCGTCTGTTGATGTGGACTGAGACAATATACTGtaggatgtttttaaaaaaaaaacttttttcacaaaTATGATGtatggttttaaaatgtaaagtggCATGACGTGATTCTATGGGCCCAAAATAACTTGGAAAATAGATTTAAGAGGCATTTCTGTTTTTGTTGCTTTCACTTGTATTCTCATTAAAAGTCCTATTTGATCCCAAGCAATCAGTCTTTCAATGCAATGCTAAACTAACTCTGGTATTATTATACCAAATGTTAATCCCATTTTGTGATATAATAAAATGATAGAACAACAGAAACCCTTATGGTGTCAAAGACAACACATCTATCTCAGTGATATACAATACAGTGCTATTTTCTGAATAATTGAGTTTTTCACAGTGATT

Function

symbol description
ppp1r3aa Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to be involved in regulation of glycogen biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of protein phosphatase type 1 complex. Human ortholog(s) of this gene implicated in hypoglycemia and type 2 diabetes mellitus. Orthologous to human PPP1R3A (protein phosphatase 1 regulatory subunit 3A).

GO:

id name namespace
GO:0005979 regulation of glycogen biosynthetic process biological_process
GO:0000164 protein phosphatase type 1 complex cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008157 protein phosphatase 1 binding molecular_function
GO:2001069 glycogen binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110914-122 Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to be involved in regulation of glycogen biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of protein phosphatase type 1 complex. Human ortholog(s) of this gene implicated in hypoglycemia and type 2 diabetes mellitus. Orthologous to human PPP1R3A (protein phosphatase 1 regulatory subunit 3A).

Ensembl:

ensembl_id ENSDARG00000090468

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053367 True 4865 mRNA 0.44 4 6572364 6580610

Neighbor

gene id symbol gene type direction distance location
XLOC_027071 NA coding upstream 63731 6416278 ~ 6508633 (+)
XLOC_027070 tfec coding upstream 525128 6032640 ~ 6047236 (+)
XLOC_027069 NA coding upstream 608493 5957403 ~ 5963871 (+)
XLOC_027068 utp20 coding upstream 662321 5868034 ~ 5910043 (+)
XLOC_027067 lyrm5a coding upstream 721731 5848229 ~ 5850633 (+)
XLOC_027073 si:dkey-112e7.2 coding downstream 58682 6639292 ~ 6640415 (+)
XLOC_027074 gpr85 coding downstream 62811 6643421 ~ 6647605 (+)
XLOC_027075 NA coding downstream 97820 6678430 ~ 6695024 (+)
XLOC_027076 tmem168a coding downstream 154443 6735053 ~ 6749412 (+)
XLOC_027077 dock4b coding downstream 252973 6833583 ~ 6994283 (+)
XLOC_027063 CU571169.1 non-coding upstream 746024 5825368 ~ 5826340 (+)
XLOC_027053 NA non-coding upstream 1115416 5424860 ~ 5456948 (+)
XLOC_027052 BX324164.1 non-coding upstream 1116306 5420906 ~ 5456058 (+)
XLOC_027078 CR388190.2 non-coding downstream 322939 6903549 ~ 6904239 (+)
XLOC_027079 CR388190.1 non-coding downstream 334106 6914716 ~ 6914851 (+)
XLOC_027080 NA non-coding downstream 425199 7005809 ~ 7020022 (+)
XLOC_027081 FO681360.1 non-coding downstream 444557 7025167 ~ 7025283 (+)

Expression


Co-expression Network