G794932



Basic Information


Item Value
gene id G794932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32627558 ~ 32651727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU904741
cttttgccacatttcaggctccaaacataaagatataaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgctaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcattcgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttgg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU904741 True 463 lncRNA 0.38 2 32627558 32651727

Neighbor


gene id symbol gene type direction distance location
ostc ostc coding upstream 87907 32520078 ~ 32539651 (+)
rpl34 rpl34 coding upstream 128956 32494490 ~ 32498602 (+)
zgc:112271 bola2 coding upstream 502805 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 513259 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 548835 32077618 ~ 32078723 (+)
trnag-ucc-3 NA coding downstream 383218 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 383724 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 390865 33042592 ~ 33042663 (+)
trnag-ucc-7 NA coding downstream 392276 33044003 ~ 33044074 (+)
trnag-ucc-8 NA coding downstream 395084 33046811 ~ 33046882 (+)
G794884 NA non-coding upstream 64815 32561517 ~ 32562743 (+)
G794912 NA non-coding upstream 85285 32541167 ~ 32542273 (+)
G794894 NA non-coding upstream 123553 32503758 ~ 32504005 (+)
G794890 NA non-coding upstream 133312 32494034 ~ 32494246 (+)
G794871 NA non-coding upstream 146657 32480669 ~ 32480901 (+)
G794998 NA non-coding downstream 68893 32720620 ~ 32720875 (+)
G794999 NA non-coding downstream 70772 32722499 ~ 32722823 (+)
G795000 NA non-coding downstream 71688 32723415 ~ 32723665 (+)
G795002 NA non-coding downstream 74239 32725966 ~ 32726279 (+)
G795010 NA non-coding downstream 86678 32738405 ~ 32739063 (+)
G794886 LOC106577459 other upstream 40170 32583606 ~ 32587388 (+)
G794893 NA other upstream 124809 32502396 ~ 32502749 (+)
G794892 NA other upstream 125203 32501847 ~ 32502355 (+)
LOC110531915 LOC106595846 other upstream 871113 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1469695 34121422 ~ 34121740 (+)
G797056 NA other downstream 1904204 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2713261 35364988 ~ 35372148 (+)
G799053 NA other downstream 3661402 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 4382691 37034418 ~ 37035918 (+)

Expression



Co-expression Network