G795000



Basic Information


Item Value
gene id G795000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32723415 ~ 32723665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU904810
ctcagagacagtttatatctacaagccatcagactgctgaacagaacaattgaactggactgaccacctgctctgattctctgtaccttagcacacatgcactTACTCACTCCCAAACacacattcatgctacacacacatcacaactactgctaccagactcttattatacTGCTCAGTTTATACACTGCCCCATCCCACAATACAATTGTAAATATTGCACTATAAAATGTGCCTTCAGTGTATTATAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU904810 True 251 lncRNA 0.41 1 32723415 32723665

Neighbor


gene id symbol gene type direction distance location
ostc ostc coding upstream 183764 32520078 ~ 32539651 (+)
rpl34 rpl34 coding upstream 224813 32494490 ~ 32498602 (+)
zgc:112271 bola2 coding upstream 598662 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 609116 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 644692 32077618 ~ 32078723 (+)
trnag-ucc-3 NA coding downstream 311280 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 311786 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 318927 33042592 ~ 33042663 (+)
trnag-ucc-7 NA coding downstream 320338 33044003 ~ 33044074 (+)
trnag-ucc-8 NA coding downstream 323146 33046811 ~ 33046882 (+)
G794999 NA non-coding upstream 592 32722499 ~ 32722823 (+)
G794998 NA non-coding upstream 2540 32720620 ~ 32720875 (+)
G794932 NA non-coding upstream 71688 32627558 ~ 32651727 (+)
G794884 NA non-coding upstream 160672 32561517 ~ 32562743 (+)
G794912 NA non-coding upstream 181142 32541167 ~ 32542273 (+)
G795002 NA non-coding downstream 2301 32725966 ~ 32726279 (+)
G795010 NA non-coding downstream 14740 32738405 ~ 32739063 (+)
G795016 NA non-coding downstream 27509 32751174 ~ 32829127 (+)
G795146 NA non-coding downstream 236755 32960420 ~ 32962371 (+)
G795141 NA non-coding downstream 248059 32971724 ~ 33029181 (+)
G794886 LOC106577459 other upstream 136027 32583606 ~ 32587388 (+)
G794893 NA other upstream 220666 32502396 ~ 32502749 (+)
G794892 NA other upstream 221060 32501847 ~ 32502355 (+)
LOC110531915 LOC106595846 other upstream 966970 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1397757 34121422 ~ 34121740 (+)
G797056 NA other downstream 1832266 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2641323 35364988 ~ 35372148 (+)
G799053 NA other downstream 3589464 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 4310753 37034418 ~ 37035918 (+)

Expression



Co-expression Network