G795266



Basic Information


Item Value
gene id G795266
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32727581 ~ 32727829 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU905152
tctgtatagttgtctaatgttgttgGGGCTTATTAATCGGTtgatgttactcctgaatcactatgataaataAAATAGTTTAGTAGAactgagatttactttgaagtgCAAAGTGTAGCAATGAAGACGTCATTGACACAGAATGTCGTGAACCAAAATATTGAGTTCAATTCCCAGGTGAGGACTTGTTGAATAATAATGACTgcataaatgaacatgcacaatgtaatcatgtactgtgtcaaatat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU905152 True 249 lncRNA 0.34 1 32727581 32727829

Neighbor


gene id symbol gene type direction distance location
etnppl LOC106577459 coding downstream 133257 32555359 ~ 32594324 (-)
LOC110531930 NA coding downstream 207485 32516069 ~ 32520096 (-)
LOC118966026 NA coding downstream 213585 32513091 ~ 32513996 (-)
LOC110531927 LOC106577456 coding downstream 279680 32274254 ~ 32447901 (-)
LOC118966025 NA coding downstream 483659 32241007 ~ 32243922 (-)
trnap-agg-9 NA coding upstream 301908 33029737 ~ 33029808 (-)
trnap-agg-10 NA coding upstream 303292 33031121 ~ 33031192 (-)
trnap-agg-11 NA coding upstream 304680 33032509 ~ 33032580 (-)
trnap-agg-12 NA coding upstream 306065 33033894 ~ 33033965 (-)
trnap-agg-13 NA coding upstream 307980 33035809 ~ 33035881 (-)
G795264 NA non-coding downstream 1468 32725896 ~ 32726113 (-)
G795258 NA non-coding downstream 11342 32715977 ~ 32716239 (-)
G795236 NA non-coding downstream 11691 32686182 ~ 32715890 (-)
G795198 NA non-coding downstream 75878 32627742 ~ 32651703 (-)
G795188 NA non-coding downstream 132958 32594370 ~ 32594623 (-)
G795267 NA non-coding upstream 326 32728155 ~ 32728393 (-)
G795420 NA non-coding upstream 243631 32971460 ~ 33029183 (-)
G795421 NA non-coding upstream 266062 32993891 ~ 33008364 (-)
G795449 NA non-coding upstream 304522 33032351 ~ 33034755 (-)
G795456 NA non-coding upstream 318451 33046280 ~ 33066485 (-)
G794311 LOC106577443 other downstream 699313 32026071 ~ 32028445 (-)
G793842 NA other downstream 1065383 31661239 ~ 31662198 (-)
G793489 NA other downstream 1308608 31418455 ~ 31418973 (-)
G793472 NA other downstream 1323712 31403482 ~ 31403869 (-)
G792267 NA other downstream 2369617 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1323230 34051059 ~ 34057549 (-)
G797605 NA other upstream 2142126 34869955 ~ 34875879 (-)
G798195 NA other upstream 2626390 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2658024 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2764197 35492026 ~ 35521884 (-)

Expression



Co-expression Network