G795016



Basic Information


Item Value
gene id G795016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32751174 ~ 32829127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU904828
gtactgtgtaacatgtcatattactgtcatctgatgaagattttcaaaaggttagtgagcgatttattttttaatcctgcgtttgttgattgcaagttttggctattcaaatgagctgtgtctggtggtggttttacatatatatgtgctatgttttcgccgtaaaacattttagaaatctgacttgctggctagatgaacaaggtgtttatctttcatttgagctattggacttgttaatgtgtggaggttaaatatttttaagaatatttttgcgttccatgcgccaccgtttcagctgaacgtgggagggttgattcccaattgggaaccagtatcgtagacaggttaagaggctcctctgtcctccac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU904828 True 372 lncRNA 0.39 2 32751174 32829127

Neighbor


gene id symbol gene type direction distance location
ostc ostc coding upstream 211523 32520078 ~ 32539651 (+)
rpl34 rpl34 coding upstream 252572 32494490 ~ 32498602 (+)
zgc:112271 bola2 coding upstream 626421 32122682 ~ 32124851 (+)
LOC110531922 LOC106577451 coding upstream 636875 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 672451 32077618 ~ 32078723 (+)
trnag-ucc-3 NA coding downstream 205818 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 206324 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 213465 33042592 ~ 33042663 (+)
trnag-ucc-7 NA coding downstream 214876 33044003 ~ 33044074 (+)
trnag-ucc-8 NA coding downstream 217684 33046811 ~ 33046882 (+)
G795010 NA non-coding upstream 12111 32738405 ~ 32739063 (+)
G795002 NA non-coding upstream 24895 32725966 ~ 32726279 (+)
G795000 NA non-coding upstream 27509 32723415 ~ 32723665 (+)
G794999 NA non-coding upstream 28351 32722499 ~ 32722823 (+)
G794998 NA non-coding upstream 30299 32720620 ~ 32720875 (+)
G795146 NA non-coding downstream 131293 32960420 ~ 32962371 (+)
G795141 NA non-coding downstream 142597 32971724 ~ 33029181 (+)
trnag-ucc-19 NA non-coding downstream 200423 33029550 ~ 33066274 (+)
trnag-ucc-10 NA non-coding downstream 217153 33046280 ~ 33049435 (+)
G794886 LOC106577459 other upstream 163786 32583606 ~ 32587388 (+)
G794893 NA other upstream 248425 32502396 ~ 32502749 (+)
G794892 NA other upstream 248819 32501847 ~ 32502355 (+)
LOC110531915 LOC106595846 other upstream 994729 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1292295 34121422 ~ 34121740 (+)
G797056 NA other downstream 1726804 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2535861 35364988 ~ 35372148 (+)
G799053 NA other downstream 3484002 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 4205291 37034418 ~ 37035918 (+)

Expression



Co-expression Network