G795448



Basic Information


Item Value
gene id G795448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33063170 ~ 33068719 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU905407
ctgcttggaaggcagctatgctcaccactataccaccaatgctatgtgcagctcagtagcaacattgagacatcgactcataatttgaccgtcattttggtggaaagtgataattcactttcacggtttaggtgtatgattatggcttaggttgcgagaggtccctggttaaaaaatctatcattttaatcactacaggttaccttcagattagtcccgtgacacttgttgggaacgtagggcaaaacggagaacattgcgacaagtggggtcacattagtttgtagcccaagattttggattctacaaacagaacttggcacatagacgcttgtgacttcagacgagtctcctgacacttgtgggggatgtagagaaacattgagaataccaccgtgttcgtgagggtctcctcattccagagagtggtcatacgaatttgtaggtcaaacggttcggaagctagagatgtttttgtgagaagaccgattataggt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU905407 True 497 lncRNA 0.44 2 33063170 33068719

Neighbor


gene id symbol gene type direction distance location
trnap-agg-24 NA coding downstream 526 33062573 ~ 33062644 (-)
trnap-agg-23 NA coding downstream 7747 33055352 ~ 33055423 (-)
trnap-agg-22 NA coding downstream 9158 33053941 ~ 33054012 (-)
trnap-agg-21 NA coding downstream 10569 33052530 ~ 33052601 (-)
trnap-agg-20 NA coding downstream 11980 33051119 ~ 33051190 (-)
trnap-agg-25 NA coding upstream 318 33069037 ~ 33069108 (-)
trnap-agg-26 NA coding upstream 1729 33070448 ~ 33070519 (-)
trnap-agg-27 NA coding upstream 3140 33071859 ~ 33071930 (-)
trnap-agg-28 NA coding upstream 4551 33073270 ~ 33073341 (-)
trnap-agg-29 NA coding upstream 5962 33074681 ~ 33074752 (-)
G795449 NA non-coding downstream 28415 33032351 ~ 33034755 (-)
G795420 NA non-coding downstream 33987 32971460 ~ 33029183 (-)
G795421 NA non-coding downstream 54806 32993891 ~ 33008364 (-)
G795267 NA non-coding downstream 334777 32728155 ~ 32728393 (-)
G795266 NA non-coding downstream 335341 32727581 ~ 32727829 (-)
G795461 NA non-coding upstream 27431 33096150 ~ 33098013 (-)
G795464 NA non-coding upstream 47486 33116205 ~ 33123267 (-)
G795474 NA non-coding upstream 167241 33235960 ~ 33236337 (-)
G795522 NA non-coding upstream 179523 33248242 ~ 33251310 (-)
LOC110531942 LOC106571840 non-coding upstream 215172 33283869 ~ 33318989 (-)
G794311 LOC106577443 other downstream 1034902 32026071 ~ 32028445 (-)
G793842 NA other downstream 1400972 31661239 ~ 31662198 (-)
G793489 NA other downstream 1644197 31418455 ~ 31418973 (-)
G793472 NA other downstream 1659301 31403482 ~ 31403869 (-)
G792267 NA other downstream 2705206 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 982340 34051059 ~ 34057549 (-)
G797605 NA other upstream 1801236 34869955 ~ 34875879 (-)
G798195 NA other upstream 2285500 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2317134 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2423307 35492026 ~ 35521884 (-)

Expression



Co-expression Network