G795461



Basic Information


Item Value
gene id G795461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33096150 ~ 33098013 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU905426
ccgagacgttcgcaatgcacctagtcttgcgactctgggacatttctaaatgtcgtcattttcgtgatgcaaaaatgaattgaagttatttcaaatgtacgaggctgtttctcggtccgagaaccgtctagagccacgtaactcgccacgcaccatggcccggaggtctagaacaggtttctaaagtttcggaactctaggtccgaccgttcttttttagctccaacaaagctaactattggggccactgtctgtctctacgcaccccaatacgtccctccatccaagttgtgttttagtgcaatttttttttcctttgattttttttgggaaaaat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU905426 True 337 lncRNA 0.45 2 33096150 33098013

Neighbor


gene id symbol gene type direction distance location
trnap-agg-31 NA coding downstream 18575 33077504 ~ 33077575 (-)
trnap-agg-30 NA coding downstream 19986 33076093 ~ 33076164 (-)
trnap-agg-29 NA coding downstream 21398 33074681 ~ 33074752 (-)
trnap-agg-28 NA coding downstream 22809 33073270 ~ 33073341 (-)
trnap-agg-27 NA coding downstream 24220 33071859 ~ 33071930 (-)
trnap-agg-32 NA coding upstream 12723 33110736 ~ 33110807 (-)
trnap-agg-33 NA coding upstream 14135 33112148 ~ 33112219 (-)
trnap-agg-34 NA coding upstream 15544 33113557 ~ 33113628 (-)
trnap-agg-35 NA coding upstream 16953 33114966 ~ 33115037 (-)
trnap-agg-36 NA coding upstream 40091 33138104 ~ 33138175 (-)
G795448 NA non-coding downstream 27431 33063170 ~ 33068719 (-)
G795456 NA non-coding downstream 29665 33046280 ~ 33066485 (-)
G795449 NA non-coding downstream 61395 33032351 ~ 33034755 (-)
G795420 NA non-coding downstream 66967 32971460 ~ 33029183 (-)
G795421 NA non-coding downstream 87786 32993891 ~ 33008364 (-)
G795464 NA non-coding upstream 18192 33116205 ~ 33123267 (-)
G795474 NA non-coding upstream 137947 33235960 ~ 33236337 (-)
G795522 NA non-coding upstream 150229 33248242 ~ 33251310 (-)
LOC110531942 LOC106571840 non-coding upstream 185878 33283869 ~ 33318989 (-)
G795591 LOC106568774 non-coding upstream 237288 33335301 ~ 33335636 (-)
G794311 LOC106577443 other downstream 1067882 32026071 ~ 32028445 (-)
G793842 NA other downstream 1433952 31661239 ~ 31662198 (-)
G793489 NA other downstream 1677177 31418455 ~ 31418973 (-)
G793472 NA other downstream 1692281 31403482 ~ 31403869 (-)
G792267 NA other downstream 2738186 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 953046 34051059 ~ 34057549 (-)
G797605 NA other upstream 1771942 34869955 ~ 34875879 (-)
G798195 NA other upstream 2256206 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2287840 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2394013 35492026 ~ 35521884 (-)

Expression



Co-expression Network