G795437


Basic Information

Item Value
gene id G795437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33106249 ~ 33106723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905391
ttgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaatacatctaaaaatttttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaacaaaaaaaaatacatcaaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905391 True 475 lncRNA 0.32 1 33106249 33106723

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-45 NA coding upstream 13651 33092527 ~ 33092598 (+)
trnag-ucc-44 NA coding upstream 14921 33091257 ~ 33091328 (+)
trnag-ucc-43 NA coding upstream 16191 33089987 ~ 33090058 (+)
trnag-ucc-42 NA coding upstream 17461 33088717 ~ 33088788 (+)
trnag-ucc-41 NA coding upstream 18731 33087447 ~ 33087518 (+)
trnag-ucc-46 NA coding downstream 3654 33110377 ~ 33110448 (+)
trnag-ucc-47 NA coding downstream 7884 33114607 ~ 33114678 (+)
trnag-ucc-48 NA coding downstream 16570 33123293 ~ 33123364 (+)
trnag-ucc-49 NA coding downstream 17839 33124562 ~ 33124633 (+)
trnag-ucc-50 NA coding downstream 19232 33125955 ~ 33126026 (+)
trnag-ucc-19 NA non-coding upstream 39975 33029550 ~ 33066274 (+)
trnag-ucc-3 NA non-coding upstream 45129 33032239 ~ 33061120 (+)
trnag-ucc-10 NA non-coding upstream 56814 33046280 ~ 33049435 (+)
G795141 NA non-coding upstream 77068 32971724 ~ 33029181 (+)
G795146 NA non-coding upstream 143878 32960420 ~ 32962371 (+)
G795438 NA non-coding downstream 9484 33116207 ~ 33123231 (+)
G795442 NA non-coding downstream 36658 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 81625 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 124352 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 144298 33251021 ~ 33316895 (+)
G794886 LOC106577459 other upstream 518861 32583606 ~ 32587388 (+)
G794893 NA other upstream 603500 32502396 ~ 32502749 (+)
G794892 NA other upstream 603894 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 981398 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1349804 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1014699 34121422 ~ 34121740 (+)
G797056 NA other downstream 1449208 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2258265 35364988 ~ 35372148 (+)
G799053 NA other downstream 3206406 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3927695 37034418 ~ 37035918 (+)

Expression


Co-expression Network