G795442



Basic Information


Item Value
gene id G795442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33143381 ~ 33143673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU905398
gcgcccaagaggtgataatcggcgttccgaccagtagcccaagatctgcctgtctgagattgctcaaggatctgcaaaagggctcatccgggatttgaacccgggacctctcgcaccctaagcgagaatcatacccctagaccaacaagccttatgccaaaagttatttttttgctttctgcagcaatgacagtgaagatatcgattgacgtgtccatggtgcttggaacgattgaacatcatgtgagtgttttgtgctttacttgtgagcataacagtcttccaaaatcttg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU905398 True 293 lncRNA 0.47 1 33143381 33143673

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-63 NA coding upstream 209 33143101 ~ 33143172 (+)
trnag-ucc-62 NA coding upstream 1618 33141692 ~ 33141763 (+)
trnag-ucc-61 NA coding upstream 2885 33140425 ~ 33140496 (+)
trnag-ucc-60 NA coding upstream 4154 33139156 ~ 33139227 (+)
trnag-ucc-59 NA coding upstream 5565 33137745 ~ 33137816 (+)
trnag-ucc-64 NA coding downstream 839 33144512 ~ 33144583 (+)
trnag-ucc-65 NA coding downstream 3505 33147178 ~ 33147249 (+)
trnag-ucc-66 NA coding downstream 6171 33149844 ~ 33149915 (+)
trnag-ucc-67 NA coding downstream 7438 33151111 ~ 33151182 (+)
trnag-ucc-68 NA coding downstream 8847 33152520 ~ 33152591 (+)
G795438 NA non-coding upstream 20150 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 36658 33106249 ~ 33106723 (+)
trnag-ucc-19 NA non-coding upstream 77107 33029550 ~ 33066274 (+)
trnag-ucc-3 NA non-coding upstream 82261 33032239 ~ 33061120 (+)
trnag-ucc-10 NA non-coding upstream 93946 33046280 ~ 33049435 (+)
G795445 NA non-coding downstream 44675 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 87402 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 107348 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 178530 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 179678 33323351 ~ 33323846 (+)
G794886 LOC106577459 other upstream 555993 32583606 ~ 32587388 (+)
G794893 NA other upstream 640632 32502396 ~ 32502749 (+)
G794892 NA other upstream 641026 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1018530 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1386936 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 977749 34121422 ~ 34121740 (+)
G797056 NA other downstream 1412258 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2221315 35364988 ~ 35372148 (+)
G799053 NA other downstream 3169456 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3890745 37034418 ~ 37035918 (+)

Expression



Co-expression Network