G795445


Basic Information

Item Value
gene id G795445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33188348 ~ 33233498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905402
caagtgtcacgggactaatctgaaggtaacctgtagtgattaaaatgctagattttttaaccagggacctctcgcaacctaagccataatcatacacctaaaccgtgaaagtgaattatcactttccaccaaaatgacggtcaaattatgagtcgatgtctcaatgttgctactgagctgcacatagcattggtggtatagtggtgagcatagctgccttccaagcagttgacctgggttcgattcccggccaatgcagagcctgaggaattcatttgttttaggggctggatgtcatttcaagtgtattacatttgaatcattatcgttgtacttggaagtcagaattgctcctacat
>TU905403
caagtgtcacgggactaatctgaaggtaacctgtagtgattaaaatgctagattttttaaccagggacctctcgcaacctaagccataatcatacacctaaaccgtgaaagtgaattatcactttccaccaaaatgacggtcaaattatgagtcgatgtctcaatgttgctactgagctgcacatagcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgcagagcctgaggaattcatttgttttaggggctggatgtcatttcaagtgtattacatttgaatcattatcgttgtacttggaagtcagaattgctcctacattctgcaggttatctaaaataataaatgttgtgcgacgttgaaccaacaagtgcatatcaaaatagatttgcagtcccatcgccaaaaccattcagccaccttgtcctgcgcccaagaggtgataatcggcgttccgaccagtggcccaagatctgcctgtctgagattgctcaaggatctgcaaaagggctcatccgggatttgaacccgggccctctcgcaccctaagcgagaatcatacccctagaccaacgagccttatgccaaaagttatttttttgctttctgcagcaatgacagtgaagatatcgattgacgtgtccatggtgcttgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905402 False 359 lncRNA 0.42 2 33188348 33215920
TU905403 True 694 lncRNA 0.45 2 33188348 33233498

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-93 NA coding upstream 509 33187768 ~ 33187839 (+)
trnag-ucc-92 NA coding upstream 1778 33186499 ~ 33186570 (+)
trnag-ucc-91 NA coding upstream 3047 33185230 ~ 33185301 (+)
trnag-ucc-90 NA coding upstream 4316 33183961 ~ 33184032 (+)
trnag-ucc-89 NA coding upstream 7136 33181141 ~ 33181212 (+)
trnag-ucc-127 NA coding downstream 902 33234400 ~ 33234471 (+)
trnag-ucc-128 NA coding downstream 2310 33235808 ~ 33235879 (+)
trnag-ucc-129 NA coding downstream 3718 33237216 ~ 33237287 (+)
trnag-ucc-130 NA coding downstream 5126 33238624 ~ 33238695 (+)
trnag-ucc-131 NA coding downstream 6534 33240032 ~ 33240103 (+)
G795442 NA non-coding upstream 44675 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 65117 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 81625 33106249 ~ 33106723 (+)
trnag-ucc-19 NA non-coding upstream 122074 33029550 ~ 33066274 (+)
G795477 NA non-coding downstream 17523 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 88705 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 89853 33323351 ~ 33323846 (+)
G795568 NA non-coding downstream 94617 33328115 ~ 33328354 (+)
G795617 NA non-coding downstream 157834 33391332 ~ 33391805 (+)
G794886 LOC106577459 other upstream 600960 32583606 ~ 32587388 (+)
G794893 NA other upstream 685599 32502396 ~ 32502749 (+)
G794892 NA other upstream 685993 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1063497 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1431903 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 887924 34121422 ~ 34121740 (+)
G797056 NA other downstream 1322433 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2131490 35364988 ~ 35372148 (+)
G799053 NA other downstream 3079631 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3800920 37034418 ~ 37035918 (+)

Expression


Co-expression Network