G795447



Basic Information


Item Value
gene id G795447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33231075 ~ 33232779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU905405
tcgttgtacttggaagtcagaattgctcctacattctgcaggttatctaaaataataaatgttgtgcgacgttgaaccaacaagtgtatatcaaaatagatttgcagtcccatcgccaaaaccattcagccaccttgtcctgcgcccaagaggtgataatcggcgttccgaccagtggcccaagatctgcctgtctgagattgctcaaggatctgcaaaagggctcatccgggatttgaacccgggacctctcgcaccctaagcgagaatcatacccctagaccaacgagccttat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU905405 True 296 lncRNA 0.48 2 33231075 33232779

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-124 NA coding upstream 68 33230936 ~ 33231007 (+)
trnag-ucc-123 NA coding upstream 1393 33229611 ~ 33229682 (+)
trnag-ucc-122 NA coding upstream 2718 33228286 ~ 33228357 (+)
trnag-ucc-121 NA coding upstream 4127 33226877 ~ 33226948 (+)
trnag-ucc-120 NA coding upstream 5536 33225468 ~ 33225539 (+)
trnag-ucc-126 NA coding downstream 212 33232991 ~ 33233062 (+)
trnag-ucc-127 NA coding downstream 1621 33234400 ~ 33234471 (+)
trnag-ucc-128 NA coding downstream 3029 33235808 ~ 33235879 (+)
trnag-ucc-129 NA coding downstream 4437 33237216 ~ 33237287 (+)
trnag-ucc-130 NA coding downstream 5845 33238624 ~ 33238695 (+)
G795442 NA non-coding upstream 87402 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 107844 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 124352 33106249 ~ 33106723 (+)
trnag-ucc-3 NA non-coding upstream 169955 33032239 ~ 33061120 (+)
G795477 NA non-coding downstream 18242 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 89424 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 90572 33323351 ~ 33323846 (+)
G795568 NA non-coding downstream 95336 33328115 ~ 33328354 (+)
G795617 NA non-coding downstream 158553 33391332 ~ 33391805 (+)
G794886 LOC106577459 other upstream 643687 32583606 ~ 32587388 (+)
G794893 NA other upstream 728326 32502396 ~ 32502749 (+)
G794892 NA other upstream 728720 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1106224 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1474630 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 888643 34121422 ~ 34121740 (+)
G797056 NA other downstream 1323152 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2132209 35364988 ~ 35372148 (+)
G799053 NA other downstream 3080350 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3801639 37034418 ~ 37035918 (+)

Expression



Co-expression Network