G795477


Basic Information

Item Value
gene id G795477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33251021 ~ 33316895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905447
agttctgtttgtagaatccaaaatcttgggctacaaactaatgtgaccccacttgtcgcaatgttctccgttttgccctacgttcccaacaagtgtcacgggactaatctgaaggtaacctgtagtgattaaaatgatagattttttaaccagggacctctcgcaacctaagccataatcatacacctaaacccaagtctcttat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905447 True 205 lncRNA 0.41 2 33251021 33316895

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-137 NA coding upstream 1062 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 3878 33247072 ~ 33247143 (+)
trnag-ucc-135 NA coding upstream 5286 33245664 ~ 33245735 (+)
trnag-ucc-134 NA coding upstream 6694 33244256 ~ 33244327 (+)
trnag-ucc-133 NA coding upstream 8102 33242848 ~ 33242919 (+)
LOC110531943 LOC106571843 coding downstream 44367 33361262 ~ 33387966 (+)
LOC110531945 LOC106571845 coding downstream 232276 33549171 ~ 33686031 (+)
LOC110531947 LOC106571849 coding downstream 546289 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 735401 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 741174 34058069 ~ 34128871 (+)
G795445 NA non-coding upstream 17523 33188348 ~ 33233498 (+)
G795447 NA non-coding upstream 18242 33231075 ~ 33232779 (+)
G795442 NA non-coding upstream 107348 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 127790 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 144298 33106249 ~ 33106723 (+)
G795560 NA non-coding downstream 5308 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 6456 33323351 ~ 33323846 (+)
G795568 NA non-coding downstream 11220 33328115 ~ 33328354 (+)
G795617 NA non-coding downstream 74437 33391332 ~ 33391805 (+)
G795701 NA non-coding downstream 195594 33512489 ~ 33616511 (+)
G794886 LOC106577459 other upstream 663633 32583606 ~ 32587388 (+)
G794893 NA other upstream 748272 32502396 ~ 32502749 (+)
G794892 NA other upstream 748666 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1126170 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1494576 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 804527 34121422 ~ 34121740 (+)
G797056 NA other downstream 1239036 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2048093 35364988 ~ 35372148 (+)
G799053 NA other downstream 2996234 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3717523 37034418 ~ 37035918 (+)

Expression


Co-expression Network