G795560


Basic Information

Item Value
gene id G795560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33322203 ~ 33322608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905541
aagattttctatggggttgagatcggGAGACTAGCTAGTCCACTCCacgaccttgaaatgcttcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgatgatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatcagtcatcctggtccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgcttcacagtaggtatggtgttctttggatgcaactcagcattatttgtcctccaaacacgacgagttgagtttaccaaaaagttatattttggtttcatctgaccatatgacattctccca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905541 True 406 lncRNA 0.46 1 33322203 33322608

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-138 NA coding upstream 70836 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 72244 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 75060 33247072 ~ 33247143 (+)
trnag-ucc-135 NA coding upstream 76468 33245664 ~ 33245735 (+)
trnag-ucc-134 NA coding upstream 77876 33244256 ~ 33244327 (+)
LOC110531943 LOC106571843 coding downstream 38654 33361262 ~ 33387966 (+)
LOC110531945 LOC106571845 coding downstream 226563 33549171 ~ 33686031 (+)
LOC110531947 LOC106571849 coding downstream 540576 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 729688 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 735461 34058069 ~ 34128871 (+)
G795477 NA non-coding upstream 5308 33251021 ~ 33316895 (+)
G795445 NA non-coding upstream 88705 33188348 ~ 33233498 (+)
G795447 NA non-coding upstream 89424 33231075 ~ 33232779 (+)
G795442 NA non-coding upstream 178530 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 198972 33116207 ~ 33123231 (+)
G795564 NA non-coding downstream 743 33323351 ~ 33323846 (+)
G795568 NA non-coding downstream 5507 33328115 ~ 33328354 (+)
G795617 NA non-coding downstream 68724 33391332 ~ 33391805 (+)
G795701 NA non-coding downstream 189881 33512489 ~ 33616511 (+)
G795754 NA non-coding downstream 257877 33580485 ~ 33638421 (+)
G794886 LOC106577459 other upstream 734815 32583606 ~ 32587388 (+)
G794893 NA other upstream 819454 32502396 ~ 32502749 (+)
G794892 NA other upstream 819848 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1197352 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1565758 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 798814 34121422 ~ 34121740 (+)
G797056 NA other downstream 1233323 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2042380 35364988 ~ 35372148 (+)
G799053 NA other downstream 2990521 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3711810 37034418 ~ 37035918 (+)

Expression


Co-expression Network