G795564


Basic Information

Item Value
gene id G795564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33323351 ~ 33323846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905547
CAAGCTAACATTAAGTGTCAGTGCACATTTCCCTGCCATaaaaagaaatatatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgcaacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaacttgggcgtgcaaaattgttcagcccccttaagttaatactttgtagtgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905547 True 496 lncRNA 0.40 1 33323351 33323846

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-138 NA coding upstream 71984 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 73392 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 76208 33247072 ~ 33247143 (+)
trnag-ucc-135 NA coding upstream 77616 33245664 ~ 33245735 (+)
trnag-ucc-134 NA coding upstream 79024 33244256 ~ 33244327 (+)
LOC110531943 LOC106571843 coding downstream 37416 33361262 ~ 33387966 (+)
LOC110531945 LOC106571845 coding downstream 225325 33549171 ~ 33686031 (+)
LOC110531947 LOC106571849 coding downstream 539338 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 728450 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 734223 34058069 ~ 34128871 (+)
G795560 NA non-coding upstream 743 33322203 ~ 33322608 (+)
G795477 NA non-coding upstream 6456 33251021 ~ 33316895 (+)
G795445 NA non-coding upstream 89853 33188348 ~ 33233498 (+)
G795447 NA non-coding upstream 90572 33231075 ~ 33232779 (+)
G795442 NA non-coding upstream 179678 33143381 ~ 33143673 (+)
G795568 NA non-coding downstream 4269 33328115 ~ 33328354 (+)
G795617 NA non-coding downstream 67486 33391332 ~ 33391805 (+)
G795701 NA non-coding downstream 188643 33512489 ~ 33616511 (+)
G795754 NA non-coding downstream 256639 33580485 ~ 33638421 (+)
G795786 NA non-coding downstream 311679 33635525 ~ 33683587 (+)
G794886 LOC106577459 other upstream 735963 32583606 ~ 32587388 (+)
G794893 NA other upstream 820602 32502396 ~ 32502749 (+)
G794892 NA other upstream 820996 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1198500 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1566906 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 797576 34121422 ~ 34121740 (+)
G797056 NA other downstream 1232085 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2041142 35364988 ~ 35372148 (+)
G799053 NA other downstream 2989283 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3710572 37034418 ~ 37035918 (+)

Expression


Co-expression Network