G795617


Basic Information

Item Value
gene id G795617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33391332 ~ 33391805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905613
tctttacatagttgaatgtgctgacaacaaaatcacacaaaaattatcaatggaaatcaaatgtatcaacccatggaggtctggatttggagtcacactcaaaattaatgtggaaaaccacactacaggctgatccaactttgatgtaatgtccttaaaacaagtctaaatgaggctcagtagtgtgtgtggcctccacgtgcctgtatgacctccctacaatgcctgggcatgctcctgatgaggtggcggatggtctcctgagggatctcctcccagacctggactaaagcatccgccaactcctggacagtctgtggtgcaacgtagcgttggtggatggagcgagacatgatttcccagatgtgctcaattggattcaggtctggggaacgggtgagccagtccatagcatcaatgccttcctcttgcaggaactgctgacacactccagccacatgaggtctagcattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905613 True 474 lncRNA 0.48 1 33391332 33391805

Neighbor

gene id symbol gene type direction distance location
LOC110531943 LOC106571843 coding upstream 3366 33361262 ~ 33387966 (+)
trnag-ucc-138 NA coding upstream 139965 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 141373 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 144189 33247072 ~ 33247143 (+)
trnag-ucc-135 NA coding upstream 145597 33245664 ~ 33245735 (+)
LOC110531945 LOC106571845 coding downstream 157366 33549171 ~ 33686031 (+)
LOC110531947 LOC106571849 coding downstream 471379 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 660491 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 666264 34058069 ~ 34128871 (+)
LOC110531954 LOC106566658 coding downstream 889536 34281341 ~ 34298265 (+)
G795568 NA non-coding upstream 62978 33328115 ~ 33328354 (+)
G795564 NA non-coding upstream 67486 33323351 ~ 33323846 (+)
G795560 NA non-coding upstream 68724 33322203 ~ 33322608 (+)
G795477 NA non-coding upstream 74437 33251021 ~ 33316895 (+)
G795445 NA non-coding upstream 157834 33188348 ~ 33233498 (+)
G795701 NA non-coding downstream 120684 33512489 ~ 33616511 (+)
G795754 NA non-coding downstream 188680 33580485 ~ 33638421 (+)
G795786 NA non-coding downstream 243720 33635525 ~ 33683587 (+)
G795810 NA non-coding downstream 296594 33688399 ~ 33689030 (+)
G795813 NA non-coding downstream 299951 33691756 ~ 33691961 (+)
G794886 LOC106577459 other upstream 803944 32583606 ~ 32587388 (+)
G794893 NA other upstream 888583 32502396 ~ 32502749 (+)
G794892 NA other upstream 888977 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1266481 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1634887 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 729617 34121422 ~ 34121740 (+)
G797056 NA other downstream 1164126 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1973183 35364988 ~ 35372148 (+)
G799053 NA other downstream 2921324 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3642613 37034418 ~ 37035918 (+)

Expression


Co-expression Network