G795810


Basic Information

Item Value
gene id G795810
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33688399 ~ 33689030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905814
ggctatcttgaacatgcacgtTTAGTGTGGCCATGGATGAGTTATTCATTTTAATGTTAAATTAAAAGATAaccttaactttaggctatttactgcATTACTAAAGTCATTTAGAATTGTGTTAGGTtgacaaatatcaacatttaaaggagataGTTTCATCTGAGAAACTGGCTTAAtcctatttttttacttttatttttggtTAAATTGGAGAAGTTAAtgcaacatacagtgcatttgtaaagtgttcagaccccttgactttttccacattttgttacgttacaaccttattctaaaattaattatattgttttttccccctcatcaatctacacacaatacccccaaattgtatttatttatttttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagtagtttgacacatacaacgacacagagttagttacacatggagtaaaacaaacattcagtcaataatacagtggaaagaagtctatatacgatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacact
>TU905816
tactgcATTACTAAAGTCATTTAGAATTGTGTTAGGTtgacaaatatcaacatttaaaggagataGTTTCATCTGAGAAACTGGCTTAAtcctatttttttacttttatttttggtTAAATTGGAGAAGTTAAtgcaacatacagtgcatttgtaaagtgttcagaccccttgactttttccacattttgttacgttacaaccttattctaaaattaattatattgttttttccccctcatcaatctacacacaatacccccaaattgtatttatttatttttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagtagtttgacacatacaacgacacagagttagttacacatggagtaaaacaaacattcagtcaataatacagtggaaagaagtctatatacgatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU905814 False 632 lncRNA 0.33 1 33688399 33689030
TU905816 True 542 lncRNA 0.33 1 33688489 33689030

Neighbor

gene id symbol gene type direction distance location
LOC110531945 LOC106571845 coding upstream 2368 33549171 ~ 33686031 (+)
LOC110531943 LOC106571843 coding upstream 300433 33361262 ~ 33387966 (+)
trnag-ucc-138 NA coding upstream 437032 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 438440 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 441256 33247072 ~ 33247143 (+)
LOC110531947 LOC106571849 coding downstream 174154 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 363266 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 369039 34058069 ~ 34128871 (+)
LOC110531954 LOC106566658 coding downstream 592311 34281341 ~ 34298265 (+)
LOC110531955 143b2 coding downstream 655325 34344355 ~ 34349297 (+)
G795786 NA non-coding upstream 4812 33635525 ~ 33683587 (+)
G795754 NA non-coding upstream 49978 33580485 ~ 33638421 (+)
G795701 NA non-coding upstream 71888 33512489 ~ 33616511 (+)
G795617 NA non-coding upstream 296594 33391332 ~ 33391805 (+)
G795568 NA non-coding upstream 360045 33328115 ~ 33328354 (+)
G795813 NA non-coding downstream 2726 33691756 ~ 33691961 (+)
G795818 NA non-coding downstream 6976 33696006 ~ 33696221 (+)
G795820 NA non-coding downstream 8773 33697803 ~ 33698157 (+)
G795725 NA non-coding downstream 10797 33699827 ~ 33700300 (+)
G795726 NA non-coding downstream 16244 33705274 ~ 33705512 (+)
G794886 LOC106577459 other upstream 1101011 32583606 ~ 32587388 (+)
G794893 NA other upstream 1185650 32502396 ~ 32502749 (+)
G794892 NA other upstream 1186044 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1563548 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1931954 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 432392 34121422 ~ 34121740 (+)
G797056 NA other downstream 866901 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1675958 35364988 ~ 35372148 (+)
G799053 NA other downstream 2624099 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3345388 37034418 ~ 37035918 (+)

Expression


Co-expression Network