G796012



Basic Information


Item Value
gene id G796012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33688813 ~ 33689044 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU906038
aaatctaccattccagtgttttacttgctatattgtatttactttgccaccatggcctttttttgcctttacctcccttatctcacctcatttgctcacatcgtatatagacttctttccactgtattattgactgaatgtttgttttactccatgtgtaactaactctgtgtcgttgtatgtgtcaaactactttgctttatcttggccaggtcgcaattgtaaatgagaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU906038 True 232 lncRNA 0.37 1 33688813 33689044

Neighbor


gene id symbol gene type direction distance location
LOC118966028 NA coding downstream 345968 33341652 ~ 33342845 (-)
LOC110531942 LOC106571840 coding downstream 369824 33283869 ~ 33318989 (-)
trnap-agg-56 NA coding downstream 455392 33233350 ~ 33233421 (-)
trnap-agg-55 NA coding downstream 456038 33232704 ~ 33232775 (-)
trnap-agg-54 NA coding downstream 457447 33231295 ~ 33231366 (-)
LOC110531946 LOC106571846 coding upstream 90404 33779448 ~ 33801499 (-)
LOC110531948 LOC106571850 coding upstream 251391 33940435 ~ 33999008 (-)
LOC110531949 LOC106571850 coding upstream 317908 34006952 ~ 34034490 (-)
LOC110531953 LOC106571856 coding upstream 444526 34133570 ~ 34163176 (-)
LOC110531153 LOC106571861 coding upstream 670934 34359904 ~ 34361763 (-)
G795624 NA non-coding downstream 293226 33395213 ~ 33395587 (-)
G795620 LOC106613263 non-coding downstream 296498 33391985 ~ 33392315 (-)
G795616 NA non-coding downstream 298264 33390009 ~ 33390549 (-)
G795610 NA non-coding downstream 319995 33367844 ~ 33368818 (-)
G795605 NA non-coding downstream 330860 33357753 ~ 33357953 (-)
G796013 NA non-coding upstream 341 33689385 ~ 33689756 (-)
G796014 NA non-coding upstream 2760 33691804 ~ 33692043 (-)
G796015 NA non-coding upstream 3427 33692471 ~ 33692723 (-)
G796018 NA non-coding upstream 6086 33695130 ~ 33695521 (-)
G796025 NA non-coding upstream 10573 33699617 ~ 33699950 (-)
G794311 LOC106577443 other downstream 1660545 32026071 ~ 32028445 (-)
G793842 NA other downstream 2026615 31661239 ~ 31662198 (-)
G793489 NA other downstream 2269840 31418455 ~ 31418973 (-)
G793472 NA other downstream 2284944 31403482 ~ 31403869 (-)
G792267 NA other downstream 3330849 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 362015 34051059 ~ 34057549 (-)
G797605 NA other upstream 1180911 34869955 ~ 34875879 (-)
G798195 NA other upstream 1665175 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 1696809 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 1802982 35492026 ~ 35521884 (-)

Expression



Co-expression Network