G795820


Basic Information

Item Value
gene id G795820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33697803 ~ 33698157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU905827
cttgagtattgattataaacaacgtttgccatgtttctgtcgatattatggagctaatttgaaatattttcggcgttgtcgtgaccgcaatttccagtcgatttctcagccaaacgtgaagaacaaatggagctatttcaccaacaaaaataatattttgggaaaaaaggaaagaaggtaaattaattataatGGAGTTTATAGCTCTTGGACATATTTATAGTTTAAACCACAGAAGAGAAAGTTGAATTGAGGCAGGACAAATTATGGGGAGCGGGGGAATAAACTctagtgaggaagaggaagaggttcAGGATTCTGTTAATACCTCTTATGGCTGcgatccctgtacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU905827 True 355 lncRNA 0.37 1 33697803 33698157

Neighbor

gene id symbol gene type direction distance location
LOC110531945 LOC106571845 coding upstream 11772 33549171 ~ 33686031 (+)
LOC110531943 LOC106571843 coding upstream 309837 33361262 ~ 33387966 (+)
trnag-ucc-138 NA coding upstream 446436 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 447844 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 450660 33247072 ~ 33247143 (+)
LOC110531947 LOC106571849 coding downstream 165027 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 354139 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 359912 34058069 ~ 34128871 (+)
LOC110531954 LOC106566658 coding downstream 583184 34281341 ~ 34298265 (+)
LOC110531955 143b2 coding downstream 646198 34344355 ~ 34349297 (+)
G795818 NA non-coding upstream 1582 33696006 ~ 33696221 (+)
G795813 NA non-coding upstream 5842 33691756 ~ 33691961 (+)
G795810 NA non-coding upstream 8773 33688399 ~ 33689030 (+)
G795786 NA non-coding upstream 14216 33635525 ~ 33683587 (+)
G795754 NA non-coding upstream 59382 33580485 ~ 33638421 (+)
G795725 NA non-coding downstream 1670 33699827 ~ 33700300 (+)
G795726 NA non-coding downstream 7117 33705274 ~ 33705512 (+)
G795801 NA non-coding downstream 9664 33707821 ~ 33708370 (+)
G795800 NA non-coding downstream 14298 33712455 ~ 33712956 (+)
G796035 NA non-coding downstream 18407 33716564 ~ 33717275 (+)
G794886 LOC106577459 other upstream 1110415 32583606 ~ 32587388 (+)
G794893 NA other upstream 1195054 32502396 ~ 32502749 (+)
G794892 NA other upstream 1195448 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1572952 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1941358 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 423265 34121422 ~ 34121740 (+)
G797056 NA other downstream 857774 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1666831 35364988 ~ 35372148 (+)
G799053 NA other downstream 2614972 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3336261 37034418 ~ 37035918 (+)

Expression


Co-expression Network