G796025



Basic Information


Item Value
gene id G796025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33699617 ~ 33699950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU906051
ggctgtttaggttttcatgATACGTTTTATTGGTTTGTAttgtatatattttattaaacatgtatcgaaataaccacgctgcattttggtccgcctctccttcgacagAAGAATCCCATGACACATCAGTGCTAAAGTTGATAGACTACCTTTAAATGAACCTCTATACAAATGAATTAACTACATATTGCATTTAAGTTATTTACATGAAGAGCATCTGTACTTAAAAGTACTTAAAACATCATATCAGGTGTTAAAAAAAGGTCATGCAAAATATcacatatactgttcttccacaaactgaaatcatcactggagatgtactgttcttcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU906051 True 334 lncRNA 0.33 1 33699617 33699950

Neighbor


gene id symbol gene type direction distance location
LOC118966028 NA coding downstream 356772 33341652 ~ 33342845 (-)
LOC110531942 LOC106571840 coding downstream 380628 33283869 ~ 33318989 (-)
trnap-agg-56 NA coding downstream 466196 33233350 ~ 33233421 (-)
trnap-agg-55 NA coding downstream 466842 33232704 ~ 33232775 (-)
trnap-agg-54 NA coding downstream 468251 33231295 ~ 33231366 (-)
LOC110531946 LOC106571846 coding upstream 79498 33779448 ~ 33801499 (-)
LOC110531948 LOC106571850 coding upstream 240485 33940435 ~ 33999008 (-)
LOC110531949 LOC106571850 coding upstream 307002 34006952 ~ 34034490 (-)
LOC110531953 LOC106571856 coding upstream 433620 34133570 ~ 34163176 (-)
LOC110531153 LOC106571861 coding upstream 660028 34359904 ~ 34361763 (-)
G796018 NA non-coding downstream 4096 33695130 ~ 33695521 (-)
G796015 NA non-coding downstream 6894 33692471 ~ 33692723 (-)
G796014 NA non-coding downstream 7574 33691804 ~ 33692043 (-)
G796013 NA non-coding downstream 9861 33689385 ~ 33689756 (-)
G796012 NA non-coding downstream 10573 33688813 ~ 33689044 (-)
G796026 NA non-coding upstream 12 33699962 ~ 33700251 (-)
G796027 NA non-coding upstream 417 33700367 ~ 33700741 (-)
G796030 NA non-coding upstream 8853 33708803 ~ 33710918 (-)
G796031 NA non-coding upstream 12215 33712165 ~ 33713122 (-)
G796032 NA non-coding upstream 13231 33713181 ~ 33713386 (-)
G794311 LOC106577443 other downstream 1671349 32026071 ~ 32028445 (-)
G793842 NA other downstream 2037419 31661239 ~ 31662198 (-)
G793489 NA other downstream 2280644 31418455 ~ 31418973 (-)
G793472 NA other downstream 2295748 31403482 ~ 31403869 (-)
G792267 NA other downstream 3341653 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 351109 34051059 ~ 34057549 (-)
G797605 NA other upstream 1170005 34869955 ~ 34875879 (-)
G798195 NA other upstream 1654269 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 1685903 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 1792076 35492026 ~ 35521884 (-)

Expression



Co-expression Network