G796041


Basic Information

Item Value
gene id G796041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33719766 ~ 33719983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906071
GACATTACCTGgtttaaatgctatttctagagacaatatctctttcattatcactatatgcacaggtttacccccactgtattcacatcttactatacctttgtctgtacattatgccttgaatatattctaccgtgcccagaaatctgctccttttactctctgttctgaacgtactaggCATCCAGTTttgttagcctttagccgtacccttatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906071 True 218 lncRNA 0.39 1 33719766 33719983

Neighbor

gene id symbol gene type direction distance location
LOC110531945 LOC106571845 coding upstream 33735 33549171 ~ 33686031 (+)
LOC110531943 LOC106571843 coding upstream 331800 33361262 ~ 33387966 (+)
trnag-ucc-138 NA coding upstream 468399 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 469807 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 472623 33247072 ~ 33247143 (+)
LOC110531947 LOC106571849 coding downstream 143201 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 332313 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 338086 34058069 ~ 34128871 (+)
LOC110531954 LOC106566658 coding downstream 561358 34281341 ~ 34298265 (+)
LOC110531955 143b2 coding downstream 624372 34344355 ~ 34349297 (+)
G796035 NA non-coding upstream 2491 33716564 ~ 33717275 (+)
G795800 NA non-coding upstream 6810 33712455 ~ 33712956 (+)
G795801 NA non-coding upstream 11396 33707821 ~ 33708370 (+)
G795726 NA non-coding upstream 14254 33705274 ~ 33705512 (+)
G795725 NA non-coding upstream 19466 33699827 ~ 33700300 (+)
G796045 NA non-coding downstream 4173 33724156 ~ 33724391 (+)
G796044 NA non-coding downstream 5058 33725041 ~ 33725422 (+)
G796057 NA non-coding downstream 10948 33730931 ~ 33731160 (+)
G796149 NA non-coding downstream 147389 33867372 ~ 33867668 (+)
G796173 NA non-coding downstream 191001 33910984 ~ 33915989 (+)
G794886 LOC106577459 other upstream 1132378 32583606 ~ 32587388 (+)
G794893 NA other upstream 1217017 32502396 ~ 32502749 (+)
G794892 NA other upstream 1217411 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1594915 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1963321 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 401439 34121422 ~ 34121740 (+)
G797056 NA other downstream 835948 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1645005 35364988 ~ 35372148 (+)
G799053 NA other downstream 2593146 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3314435 37034418 ~ 37035918 (+)

Expression


Co-expression Network