G796045


Basic Information

Item Value
gene id G796045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33724156 ~ 33724391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906080
agaggtcagtaatccagggcagtgtcacaaggtacagaacggcaggcaggctcagggtcagggcaggcagaatggtcaaaactgggaaaactagaaaacagggactagagAGAAAAACAGGAGTACGGgtaaaacgctggtaggcttgacgagaaggcgaactggcaacagacaaacagaaaacacagataTGAATGGACAGGGGATAATGGAGAATATGGACGACActtggaggg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106608107 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906080 True 236 lncRNA 0.50 1 33724156 33724391

Neighbor

gene id symbol gene type direction distance location
LOC110531945 LOC106571845 coding upstream 38125 33549171 ~ 33686031 (+)
LOC110531943 LOC106571843 coding upstream 336190 33361262 ~ 33387966 (+)
trnag-ucc-138 NA coding upstream 472789 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 474197 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 477013 33247072 ~ 33247143 (+)
LOC110531947 LOC106571849 coding downstream 138793 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 327905 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 333678 34058069 ~ 34128871 (+)
LOC110531954 LOC106566658 coding downstream 556950 34281341 ~ 34298265 (+)
LOC110531955 143b2 coding downstream 619964 34344355 ~ 34349297 (+)
G796041 NA non-coding upstream 4173 33719766 ~ 33719983 (+)
G796035 NA non-coding upstream 6881 33716564 ~ 33717275 (+)
G795800 NA non-coding upstream 11200 33712455 ~ 33712956 (+)
G795801 NA non-coding upstream 15786 33707821 ~ 33708370 (+)
G795726 NA non-coding upstream 18644 33705274 ~ 33705512 (+)
G796044 NA non-coding downstream 650 33725041 ~ 33725422 (+)
G796057 NA non-coding downstream 6540 33730931 ~ 33731160 (+)
G796149 NA non-coding downstream 142981 33867372 ~ 33867668 (+)
G796173 NA non-coding downstream 186593 33910984 ~ 33915989 (+)
G796325 NA non-coding downstream 223234 33947625 ~ 33949058 (+)
G794886 LOC106577459 other upstream 1136768 32583606 ~ 32587388 (+)
G794893 NA other upstream 1221407 32502396 ~ 32502749 (+)
G794892 NA other upstream 1221801 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1599305 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1967711 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 397031 34121422 ~ 34121740 (+)
G797056 NA other downstream 831540 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1640597 35364988 ~ 35372148 (+)
G799053 NA other downstream 2588738 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3310027 37034418 ~ 37035918 (+)

Expression


Co-expression Network