Gene
RNA
| Item | Value |
|---|---|
| gene id | G796173 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 33910984 ~ 33915989 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU906213 | False | 357 | lncRNA | 0.49 | 2 | 33910984 | 33915989 |
| TU906214 | True | 357 | lncRNA | 0.49 | 2 | 33910984 | 33915989 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531945 | LOC106571845 | coding | upstream | 224953 | 33549171 ~ 33686031 (+) |
| LOC110531943 | LOC106571843 | coding | upstream | 523018 | 33361262 ~ 33387966 (+) |
| trnag-ucc-138 | NA | coding | upstream | 659617 | 33251296 ~ 33251367 (+) |
| trnag-ucc-137 | NA | coding | upstream | 661025 | 33249888 ~ 33249959 (+) |
| trnag-ucc-136 | NA | coding | upstream | 663841 | 33247072 ~ 33247143 (+) |
| rl32 | rl32 | coding | downstream | 136307 | 34052296 ~ 34057570 (+) |
| LOC110531951 | LOC106571855 | coding | downstream | 142080 | 34058069 ~ 34128871 (+) |
| LOC110531954 | LOC106566658 | coding | downstream | 365352 | 34281341 ~ 34298265 (+) |
| LOC110531955 | 143b2 | coding | downstream | 428366 | 34344355 ~ 34349297 (+) |
| LOC118966029 | NA | coding | downstream | 469895 | 34385884 ~ 34392962 (+) |
| G796149 | NA | non-coding | upstream | 43316 | 33867372 ~ 33867668 (+) |
| G796057 | NA | non-coding | upstream | 179824 | 33730931 ~ 33731160 (+) |
| G796044 | NA | non-coding | upstream | 185562 | 33725041 ~ 33725422 (+) |
| G796045 | NA | non-coding | upstream | 186593 | 33724156 ~ 33724391 (+) |
| G796041 | NA | non-coding | upstream | 191001 | 33719766 ~ 33719983 (+) |
| G796325 | NA | non-coding | downstream | 31636 | 33947625 ~ 33949058 (+) |
| G796331 | NA | non-coding | downstream | 36842 | 33952831 ~ 33953833 (+) |
| G796394 | NA | non-coding | downstream | 119411 | 34035400 ~ 34035768 (+) |
| G796441 | NA | non-coding | downstream | 126447 | 34042436 ~ 34043094 (+) |
| G796456 | NA | non-coding | downstream | 146452 | 34062441 ~ 34062644 (+) |
| G794886 | LOC106577459 | other | upstream | 1323596 | 32583606 ~ 32587388 (+) |
| G794893 | NA | other | upstream | 1408235 | 32502396 ~ 32502749 (+) |
| G794892 | NA | other | upstream | 1408629 | 32501847 ~ 32502355 (+) |
| zgc:112271 | bola2 | other | upstream | 1786133 | 32122682 ~ 32124851 (+) |
| LOC110531915 | LOC106595846 | other | upstream | 2154539 | 31753182 ~ 31757502 (+) |
| G796495 | LOC106613263 | other | downstream | 205433 | 34121422 ~ 34121740 (+) |
| G797056 | NA | other | downstream | 639942 | 34555931 ~ 34556622 (+) |
| G797932 | pphln | other | downstream | 1448999 | 35364988 ~ 35372148 (+) |
| G799053 | NA | other | downstream | 2397140 | 36313129 ~ 36316805 (+) |
| G799578 | LOC106571900 | other | downstream | 3118429 | 37034418 ~ 37035918 (+) |
