XLOC_027082


Basic Information

Item Value
gene id XLOC_027082
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 7111729 ~ 7112022 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057598
CGGGACAACCACATAgctgatgatgattggtgtgtgtgtgtaggtgtgggacaaccacataactgatgatgtaTGGCATATGTGTTTAgcggtgggacaaccacTtaactgatgatgattgttgtgtttgtgtgtaggtgtgggacaaacacataaataatgaTGAATGATGTGTGTAGGAGTGGAACAACCACATatctga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057598 True 202 lncRNA 0.43 2 7111729 7112022

Neighbor

gene id symbol gene type direction distance location
XLOC_027081 FO681360.1 coding upstream 86446 7025167 ~ 7025283 (+)
XLOC_027080 NA coding upstream 91707 7005809 ~ 7020022 (+)
XLOC_027077 dock4b coding upstream 117446 6833583 ~ 6994283 (+)
XLOC_027079 CR388190.1 coding upstream 196878 6914716 ~ 6914851 (+)
XLOC_027078 CR388190.2 coding upstream 207490 6903549 ~ 6904239 (+)
XLOC_027083 FO681358.1 coding downstream 51736 7163758 ~ 7163874 (+)
XLOC_027084 tnni4a coding downstream 279088 7391110 ~ 7409313 (+)
XLOC_027085 NA coding downstream 303258 7415280 ~ 7506470 (+)
XLOC_027086 tnnt2e coding downstream 396294 7508316 ~ 7544687 (+)
XLOC_027087 NA coding downstream 433638 7545660 ~ 7595697 (+)
XLOC_027075 NA non-coding upstream 416705 6678430 ~ 6695024 (+)
XLOC_027088 NA non-coding downstream 540552 7652574 ~ 7666746 (+)
XLOC_027090 NA non-coding downstream 603579 7715601 ~ 7717659 (+)

Expression


Co-expression Network