G796809



Basic Information


Item Value
gene id G796809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34172510 ~ 34172777 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU906896
tcccagttcgacaataaatgactgatttgttccacaAAGTttcataaagtccataatttatgtccaaatagccacttgttgttagcatgttcagcccagtaatccatcttcatgaggagtgagcacttcgtccagataaaaacttgaaaagttccattacacgtcatagaaacaagtcaaacgatgcatgaaatcaatctttaggatgtttttaacataaaacatcaataatgttccaaccagagaattcctatgtatgaagaaaagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU906896 True 268 lncRNA 0.35 1 34172510 34172777

Neighbor


gene id symbol gene type direction distance location
LOC110531953 LOC106571856 coding downstream 9334 34133570 ~ 34163176 (-)
LOC110531949 LOC106571850 coding downstream 138020 34006952 ~ 34034490 (-)
LOC110531948 LOC106571850 coding downstream 173502 33940435 ~ 33999008 (-)
LOC110531946 LOC106571846 coding downstream 371011 33779448 ~ 33801499 (-)
LOC118966028 NA coding downstream 829665 33341652 ~ 33342845 (-)
LOC110531153 LOC106571861 coding upstream 187201 34359904 ~ 34361763 (-)
LOC110531957 LOC106571860 coding upstream 189393 34362170 ~ 34385873 (-)
LOC110531958 LOC106571859 coding upstream 256291 34429068 ~ 34531428 (-)
LOC118966030 NA coding upstream 423763 34596540 ~ 34607133 (-)
eif2d eif2d coding upstream 444723 34617500 ~ 34636294 (-)
G796797 NA non-coding downstream 52141 34119973 ~ 34120369 (-)
G796796 NA non-coding downstream 52647 34119661 ~ 34119863 (-)
G796794 NA non-coding downstream 54970 34117319 ~ 34117540 (-)
G796788 NA non-coding downstream 61434 34110875 ~ 34111076 (-)
G796787 NA non-coding downstream 62257 34109998 ~ 34110253 (-)
G796814 NA non-coding upstream 5755 34178532 ~ 34178750 (-)
G796821 NA non-coding upstream 15462 34188239 ~ 34188498 (-)
G796917 NA non-coding upstream 149618 34322395 ~ 34322938 (-)
G796918 NA non-coding upstream 150239 34323016 ~ 34323318 (-)
G796931 NA non-coding upstream 169548 34342325 ~ 34342579 (-)
G796733 rl32 other downstream 114961 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2144242 32026071 ~ 32028445 (-)
G793842 NA other downstream 2510312 31661239 ~ 31662198 (-)
G793489 NA other downstream 2753537 31418455 ~ 31418973 (-)
G793472 NA other downstream 2768641 31403482 ~ 31403869 (-)
G797605 NA other upstream 697178 34869955 ~ 34875879 (-)
G798195 NA other upstream 1181442 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 1213076 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 1319249 35492026 ~ 35521884 (-)
LOC110531979 brpf1 other upstream 1804645 35948544 ~ 35979307 (-)

Expression



Co-expression Network