G796517


Basic Information

Item Value
gene id G796517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34180169 ~ 34180461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906585
ccccagccatcctacaatctaaacttgatgccctcaatctcacacaaattatcaattaacctaccaggtacctccccaaagccttaaacacgggcaccctcatagatatcatcctaaccaacttcccctctaaatacacctctgctgtcttcaaccaagatctcagcgatcactgcctcattgcctgcatccgtaatgggtcagcggtcaaacgacctcctctcatcactgtaaaacgctccctgaaacacttcagcgagcaggcctttctaatcgacctggccggggtatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906585 True 293 lncRNA 0.49 1 34180169 34180461

Neighbor

gene id symbol gene type direction distance location
LOC110531951 LOC106571855 coding upstream 51298 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 122599 34052296 ~ 34057570 (+)
LOC110531947 LOC106571849 coding upstream 254385 33863184 ~ 33925784 (+)
LOC110531945 LOC106571845 coding upstream 494138 33549171 ~ 33686031 (+)
LOC110531943 LOC106571843 coding upstream 792203 33361262 ~ 33387966 (+)
LOC110531954 LOC106566658 coding downstream 100880 34281341 ~ 34298265 (+)
LOC110531955 143b2 coding downstream 163894 34344355 ~ 34349297 (+)
LOC118966029 NA coding downstream 205423 34385884 ~ 34392962 (+)
LOC110531960 NA coding downstream 429829 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 462458 34642919 ~ 34682784 (+)
G796489 NA non-coding upstream 69810 34110136 ~ 34110359 (+)
G796481 NA non-coding upstream 78322 34101648 ~ 34101847 (+)
G796463 NA non-coding upstream 110332 34069592 ~ 34069837 (+)
G796462 NA non-coding upstream 110847 34069110 ~ 34069322 (+)
G796456 NA non-coding upstream 117525 34062441 ~ 34062644 (+)
G796558 NA non-coding downstream 121027 34301488 ~ 34301885 (+)
G796601 NA non-coding downstream 142127 34322588 ~ 34323051 (+)
G796604 NA non-coding downstream 145643 34326104 ~ 34326407 (+)
G796617 NA non-coding downstream 162245 34342706 ~ 34342932 (+)
G796623 NA non-coding downstream 179438 34359899 ~ 34360091 (+)
G796495 LOC106613263 other upstream 58429 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 1592781 32583606 ~ 32587388 (+)
G794893 NA other upstream 1677420 32502396 ~ 32502749 (+)
G794892 NA other upstream 1677814 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 2055318 32122682 ~ 32124851 (+)
G797056 NA other downstream 375470 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1184527 35364988 ~ 35372148 (+)
G799053 NA other downstream 2132668 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2853957 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 3386784 37567245 ~ 37570411 (+)

Expression


Co-expression Network