G796917


Basic Information

Item Value
gene id G796917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34322395 ~ 34322938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907024
CATTATAGGAGGGGCCTAGATGTCGACTTGTAACAAACACTTCTACACAAAACATGTGCAAATGAAACCACAAGAGACCAGGGGAAACCTTTTTGATTGGGTTTTTTAAGTCAGAAAGGGAGGTGTTAGTAAGAAGAATTACATTCCCTTTTCATTTCTTGCTTTGGCATTAGATGTCACTTCATGCAAAAGGGTTCTGTCCAAAATTCCAGTAATCATATCCCATTGCTCTTTACTTTTAGgttccatttctctccactctgTCCACACCATTCAGTATTTTCCAGATAAACAGTTCTTATTTTTAAAAGCCAGCCTTTTTCCATGAACTTTTTTCCGACATACATAGCACAGCGGGTTTGTCAGTCCATCCAATATGGACAAAGGTCTCATCTTTCCAACATAATGGTTGATTTCATGGGGATGCAGGTGTCTGTGACAACAGGTTGGGCATGCTACAGCATAAAAAAAGGCAAACAAGTGGGTGTGATATGCATTTTACACATTCACGTTCATCTTTTCATCACATTCTAAAATGTTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907024 True 544 lncRNA 0.39 1 34322395 34322938

Neighbor

gene id symbol gene type direction distance location
LOC110531953 LOC106571856 coding downstream 159219 34133570 ~ 34163176 (-)
LOC110531949 LOC106571850 coding downstream 287905 34006952 ~ 34034490 (-)
LOC110531948 LOC106571850 coding downstream 323387 33940435 ~ 33999008 (-)
LOC110531946 LOC106571846 coding downstream 520896 33779448 ~ 33801499 (-)
LOC118966028 NA coding downstream 979550 33341652 ~ 33342845 (-)
LOC110531153 LOC106571861 coding upstream 37040 34359904 ~ 34361763 (-)
LOC110531957 LOC106571860 coding upstream 39232 34362170 ~ 34385873 (-)
LOC110531958 LOC106571859 coding upstream 106130 34429068 ~ 34531428 (-)
LOC118966030 NA coding upstream 273602 34596540 ~ 34607133 (-)
eif2d eif2d coding upstream 294562 34617500 ~ 34636294 (-)
G796821 NA non-coding downstream 133897 34188239 ~ 34188498 (-)
G796814 NA non-coding downstream 143645 34178532 ~ 34178750 (-)
G796809 NA non-coding downstream 149618 34172510 ~ 34172777 (-)
G796797 NA non-coding downstream 202026 34119973 ~ 34120369 (-)
G796796 NA non-coding downstream 202532 34119661 ~ 34119863 (-)
G796918 NA non-coding upstream 78 34323016 ~ 34323318 (-)
G796931 NA non-coding upstream 19387 34342325 ~ 34342579 (-)
G796884 NA non-coding upstream 21669 34344607 ~ 34349297 (-)
G796864 NA non-coding upstream 30433 34353371 ~ 34354172 (-)
G796866 NA non-coding upstream 33215 34356153 ~ 34356791 (-)
G796733 rl32 other downstream 264846 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2294127 32026071 ~ 32028445 (-)
G793842 NA other downstream 2660197 31661239 ~ 31662198 (-)
G793489 NA other downstream 2903422 31418455 ~ 31418973 (-)
G793472 NA other downstream 2918526 31403482 ~ 31403869 (-)
G797605 NA other upstream 547017 34869955 ~ 34875879 (-)
G798195 NA other upstream 1031281 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 1062915 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 1169088 35492026 ~ 35521884 (-)
LOC110531979 brpf1 other upstream 1654484 35948544 ~ 35979307 (-)

Expression


Co-expression Network